Thermobifida halotolerans: NI17_011025
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Entry
NI17_011025 CDS
T08032
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
thao
Thermobifida halotolerans
Brite
KEGG Orthology (KO) [BR:
thao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
thao03051
]
NI17_011025 (pafA)
Enzymes [BR:
thao01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
NI17_011025 (pafA)
Proteasome [BR:
thao03051
]
Prokaryotic proteasome
Bacterial regulatory particles
NI17_011025 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UOE21578
UniProt:
A0A399G364
LinkDB
All DBs
Position
complement(2479086..2480444)
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AA seq
452 aa
AA seq
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MERRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDSLVDLVAHDKAGERILEGLQVDAEQRLHEEGIAGDIYLFKNNTDSAGNSY
GCHENYLVGRHGEFGRLADILIPFLVTRQIICGAGKVLQTPRGALYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERFRRLHVIVGDSNMSETTTLLKLASTDLVLRMIEANVVM
RDYTLENPIRAIREVSHDMTGRRKVRLANGREASALEIQREYLEKVQNFADRNGVDATGK
RVLELWQRTLEAVETGNLDLVAREIDWVAKYQLLERYRAKHGLSLSSPRVAQLDLTYHDI
HRDRGLFYLMQRRGQMERVVSDLKIFEAKSVPPQTTRARLRGEFIKKAQEKRRDFTVDWV
HLKLNDQAQRTVLCKDPFKALDERVEKLIAGM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtggaacgtcgcatcttcggtctggagaacgagtacggggtcacctgcacgttccggggg
cagcggcggctgtcgccggacgaggtggcccgctatctgttccgtcgggtggtgtcgtgg
gggcgcagctccaacgtgttcctgcgcaacggcgcgcggctctacctggacgtgggttcc
catcccgagtacgccacccccgaatgcgacagcctggtcgacctggttgcgcacgacaag
gccggtgagcgcatcctggaggggctgcaggtcgacgccgagcagcgcctgcacgaggag
ggcatcgccggggacatctacctgttcaagaacaacaccgactcggcgggcaactcctac
ggctgccacgagaactacctggtggggcggcacggcgagttcgggagactggccgacatc
ctcatcccgttcctggtgacccgccagatcatctgcggcgcgggcaaggtgctgcagacc
ccgcggggggcgctgtactgcgtgagccagcgcgccgagcacatctgggagggcgtgtcc
tcggccaccacccggtcccgtcccatcatcaacacccgcgacgagccgcacgccgacgcc
gagcggttccggcggctgcacgtcatcgtgggcgactccaacatgagcgagaccacgacc
ctgctcaagctcgcctccaccgacctggtgctgcgcatgatcgaggcgaacgtggtcatg
cgcgactacacgctggagaacccgatccgggcgatccgcgaggtcagccacgacatgacg
ggccgccgcaaggtgcggctggccaacggccgcgaggccagcgcgctggagatccagcgc
gagtacctggagaaggtgcagaacttcgccgaccgcaacggggtcgacgccaccggcaag
cgggtgctggagctgtggcagcgcaccctggaggcggtcgagaccggcaacctggacctg
gtggcgcgcgagatcgactgggtggccaagtaccagttgctggagcgctaccgcgccaag
cacgggctgagcctgtcgtcgccccgggtggcccagctcgacctgacctaccacgacatc
caccgcgaccgggggctgttctacctgatgcagcggcgcgggcagatggagcgggtcgtc
agcgacctgaagatcttcgaggccaagtcggtgccgccgcagaccacccgggcccggctg
cgcggcgagttcatcaagaaggcgcaggagaagcgccgcgacttcacggtggactgggtg
cacctcaagctcaacgaccaggcccagcgcaccgtgctgtgcaaggaccccttcaaggcc
ctcgacgagcgggtcgagaagctcatcgcgggcatgtga
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