Thalassomonas haliotis: H3N35_10900
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Entry
H3N35_10900 CDS
T08805
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
that
Thalassomonas haliotis
Brite
KEGG Orthology (KO) [BR:
that00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
that03009
]
H3N35_10900 (rimO)
Enzymes [BR:
that01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
H3N35_10900 (rimO)
Ribosome biogenesis [BR:
that03009
]
Prokaryotic type
ribosomal protein modification factors
H3N35_10900 (rimO)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WDE13899
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All DBs
Position
2623505..2624926
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AA seq
473 aa
AA seq
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MTVEQFNPKQTTTLDIPSKTIEANQAELAPQGGEAKRSRIGFISLGCPKNLVDSERILTQ
LRTEGYDVVNSYDDAELVIVNTCGFIDSAVKESLDTIGEALTENGKVLVTGCLGAKEDEI
TEIHPNVLGVTGPHAYEEVLNQVHRHVTKPKHDPFISLVPDHGIKLTPKHFAYLKISEGC
DHRCTFCIIPSMRGDLDSRPVGDVLGEAKRLVNAGVKELLVISQDTSAYGVDVKHKTDFW
DGMPVKTHMQALCEQLSKMGVWVRLHYVYPYPHVDNVIPLMAEGKILPYLDIPFQHANKR
ILKLMKRPGSPERTLERIKKWRETCPELVIRSTFIVGFPGETEEEFAELLAFLEEAQLDR
VGCFKYSPVEGARANELPDQIDEAVKEERLQRFMAVQAKISADKLQQRIGQEYLILIDEV
NSEGAVGRSYMDAPEVDGKVYLTDEFDVQPGDQVWVQIIHADEHDVWGVRVED
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaacaattcaatcccaagcaaaccacgactttagacattccttcaaaaacc
attgaagcgaatcaagcagaacttgcgccccaggggggagaagccaagcgttcacgcata
ggttttatttcactgggctgcccgaaaaacctggtggactctgagcgtatcctgacccag
ctgagaaccgaaggttatgatgtcgtcaacagttatgacgatgccgagctggtgattgtt
aatacctgtggttttatcgattctgcggtaaaagagtcgctggacacaatcggcgaggca
ctaacggaaaacggcaaggtgttggtaaccggttgtttaggcgccaaagaagatgaaatt
accgagattcatcccaacgtactgggcgtcaccgggccgcatgcctatgaagaagtgctc
aaccaggtgcatcggcatgttactaagccgaaacacgacccctttatttccctggtgccg
gatcatggcattaaactgaccccgaaacattttgcctatttgaagatatctgaaggctgc
gatcaccgctgtaccttctgtattatcccgtcgatgcgcggcgatctcgactcccgcccc
gtgggagatgttttgggtgaagcgaaacgcctggtgaatgccggggttaaagagttattg
gtgatttcacaggatacttccgcttacggcgtagatgttaagcataaaaccgacttttgg
gacggtatgccggtgaaaacccatatgcaggccctgtgcgagcaattatcaaaaatgggc
gtttgggtgcgcttgcattatgtttatccgtatcctcatgtggataatgtgatcccgctg
atggcagaaggtaaaatcttgccttacctggatatcccgttccagcatgccaacaagcgt
atcttaaagttgatgaaacgtcccggcagcccggagcgcactttagagcgcattaaaaag
tggcgggaaacctgtcctgagctggtgatccgctcgacctttattgtcggcttcccggga
gagaccgaagaagagtttgctgagttgctggcgtttttagaagaagcccagcttgatcgg
gttggttgttttaagtattcaccggttgaaggcgcccgggccaacgagctgccggatcaa
atcgatgaagctgttaaagaagagcgtttacagcgttttatggctgtgcaggcgaaaatc
agcgccgataaactgcagcaacgcattggccaggaatacttgatcctcattgatgaagtt
aacagcgaaggggcggttggccgcagttatatggatgcaccggaagttgatggtaaggtt
tatctgaccgatgaatttgatgtgcagccaggcgatcaggtatgggtacagatcatccac
gccgacgagcatgacgtttggggcgtgcgggtagaagattaa
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