Thermococcus aciditolerans: FPV09_05175
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Entry
FPV09_05175 CDS
T07677
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
them
Thermococcus aciditolerans
Pathway
them03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
them00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FPV09_05175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
them03021
]
FPV09_05175
Enzymes [BR:
them01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FPV09_05175
Transcription machinery [BR:
them03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
FPV09_05175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
NOB1_Zn_bind
DUF5816
Cys_rich_CPCC
Motif
Other DBs
NCBI-ProteinID:
QEK14595
UniProt:
A0A5C0SJ96
LinkDB
All DBs
Position
939084..942452
Genome browser
AA seq
1122 aa
AA seq
DB search
MASRGPTVVDVTPDDLWLVMDAYWKERGLVRQHLDSYNAFIDNGMQQVIYEFGGLKPDIP
DFEVKFGKIRLGEPEFQEAQGQRKPLYPMDARIRNLTYSAPLYLELIPVIKGIEQEAVEV
RIGELPIMLKSKACRLYGLSDEELIKLGEDPKDPGGYFIINGSERVIVSIEDLAPNKTLV
ERDERQNRIIAKVFSYRHGYRALITVERRKDGILYVNIPNVPRPVKFVYVMRALGLLSDK
EIVEAVSDDPRIQQVLFDNLEDASDVMNQEDALDYIGKLSLPGQPKEYRLRRAEHIIDNN
LLPHMGVEPERRKAKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLKLAGDLLRDLFRV
AFGQLVKDMQYQMTKTYQRKGERYTFENIQRFVRNSIRPDVLSERIEHALATGAWPGGRT
GVSQLLDRTNYMSTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVK
NLSLMSQITTGIPEEEVMEYLNKLGVVSIEERRPSPELWRLYLNGVLIGTIEDGESLVRR
IRSDRRSGKISDVINVAIYQDEEVREVYVNSDDGRVRRPLIIVENGQPKLTKEHVDAIKS
GALTWNDLVKMGVIEYLDAEEEENALVATWPWEVTEEHTHLELMPAAILGIPASLVPYPE
HNAAPRNTYGAGMAKQSLGFGAANFRIRVDTRGHLMHYPQVPLVNSRIMKAVGFEERPAG
QNFVVAVLSYGGYNMEDAIIMNKASIERGLGRSTFFRTYEAEEKRYLGGQTDRFEVPDPT
IQGYLGEKYYRHLDEDGIIFPESKVTGKDVLVGRTSPPRFLEEQSGLGGIILQERRETSV
TVRPSERGIVDKVIITETGDGTKLVKVTTRDLRIPEFGDKFASRHGQKGVVGLIVPQEDM
PWTESGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVAALTGRRVDGTAFIGEPEEKLRKEL
EELGFKHSGREVMYDGITGRRLEADIFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPT
EGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCESCGHLALEDKRRGKV
YCPVCGEEEKISKVEMSYAFKLLLDELKAMGIRPSLKITDRV
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgagaggaccaaccgttgtggatgttactcctgacgacctctggctcgttatg
gacgcctactggaaggagaggggacttgtaagacagcatcttgattcttacaacgctttc
attgacaacggcatgcagcaggtcatatacgagttcggcggactgaagccggatattccg
gacttcgaggttaagttcggtaaaatacgcctgggcgaacccgagttccaggaggcccag
ggacagaggaagccgctctacccgatggacgccaggataaggaacctcacgtactccgca
ccgctatacctcgagctcatcccggtcatcaagggcatcgagcaggaggccgtcgaggtc
cgcattggagagctcccgataatgctcaagtccaaggcctgcaggctttacggcctcagc
gacgaggagctcatcaagctcggcgaggatccaaaggatccgggaggatatttcatcata
aacggttctgagagggttatagtctccattgaggacctcgccccgaacaagaccctcgtt
gagcgcgacgagaggcagaacaggataatcgcaaaggtcttctcatacagacacggttac
agggccctgataaccgtcgagaggagaaaggatggtatcctctacgtcaacattccgaac
gttccgagacccgtcaagttcgtttacgttatgcgcgccctcggtcttctgagcgataaa
gagatcgtcgaggccgtgagcgacgatccgaggatacagcaggttctcttcgacaacctc
gaggacgccagcgacgtgatgaaccaggaggacgcgctcgactacataggaaagctctcc
ctgcccggtcagccgaaggagtacaggctcaggagggcggagcacatcatagacaacaac
ctcctcccgcacatgggcgtcgagcccgagaggagaaaagctaaggcctactacctcggc
atgatggccctcaaggttcttgagctttccctaggcctccgcggtgaggacgacaaggac
cactacgccaacaagaggctcaagttagcgggagacctcctcagggacctcttccgcgtc
gcattcggccagctcgtcaaggacatgcagtaccagatgaccaagacctaccagaggaag
ggcgagcgctacaccttcgagaacattcagaggtttgtgagaaactccataagacctgat
gtcctcagcgagaggatcgagcacgcccttgccaccggtgcctggcccggcggaaggacc
ggtgtgagccagcttctcgatagaacgaactacatgagcaccctttcacacctcaggcgc
gttacttccccgctcagcagggatcagccccacttcgaggcgcgtgatcttcacggaacc
cactggggaaggatctgtccgacagagacgcctgaaggtccgaactgtggtctcgttaag
aacctctccttgatgtcccagataaccaccggcatccccgaggaggaggtcatggagtac
ctgaacaagctcggcgtcgtttccatcgaggagcgccgcccgagccccgagctctggcgc
ctctacctcaacggagttctcatcgggaccatagaggacggagagtccctcgtccgcagg
ataaggagcgacaggagaagcggaaagataagcgatgtcatcaacgtggcgatataccag
gacgaggaggttcgggaggtatacgtcaacagcgacgacggccgcgtcaggaggccgctc
atcatcgtcgagaacgggcagccgaagctcaccaaggagcacgtcgatgcaataaagagc
ggggccctcacctggaacgatctggtaaagatgggcgtcatagagtacctcgacgcggaa
gaggaggagaacgccctcgtcgccacatggccctgggaggtcacggaggagcacacccac
ctcgagctcatgccggccgcgatactcggtatcccagcttcgctcgttccgtatccggag
cacaacgctgccccgcgtaacacctacggagcgggtatggccaagcagagcctcggcttt
ggtgccgccaacttcaggataagggtggacacgcgcgggcatctcatgcactacccgcag
gttccgctcgttaactcacgcatcatgaaggccgtcggttttgaggagaggccagcaggc
cagaacttcgtggtcgcggtcctcagctacggcggctacaacatggaggacgcaatcatc
atgaacaaggcctccatcgaacgcggtctcggaagaagcacgttcttcagaacatacgag
gccgaggagaagcgctatctcggcggtcagaccgaccgctttgaggttcccgaccccacc
atacagggctatctcggcgagaagtactacagacacctcgacgaggacggtataatcttc
ccggagtcaaaggtcacaggtaaggacgttctcgtcggcagaacttcaccgccgaggttc
ctcgaggagcagagcggcctcggagggataatactccaggagagaagggagacgagcgtc
accgtcaggccgagcgagaggggtatagttgacaaggttatcatcaccgagaccggcgac
ggaaccaaactcgtcaaggtgaccaccagggacctccgcatcccggagttcggagacaag
ttcgcatcgaggcacggacagaagggtgtcgtgggtctcatcgttccgcaggaggacatg
ccctggaccgagagcggaatcgttccggacctcatcgtcaacccgcatggtatcccgagc
cgtatgaccgtcggacagctcatcgaggccataggcggaaaggtcgccgccctcactgga
aggagggtcgatggaaccgcgttcattggtgagcccgaggagaagctcaggaaggagctt
gaggagcttggattcaagcacagcggcagggaggtcatgtacgacggcataaccggaaga
agactggaggctgacatattcgtcggtgtcatctactaccagaggctccaccacatggtc
gccgacaagatgcacgcgaggagcaggggtccggtgcaggttctcaccaagcagccgacc
gagggtagggccagggaaggaggtctcaggttcggtgagatggaacgtgacgtcctcatc
ggacacggcgccgcgatgcttctcatagagagactgctcgaggagagcgacaagaccgag
gtatgggtctgcgagagctgcggacacctggcactcgaggacaagcgcagaggaaaggtc
tactgcccggtctgtggagaggaagagaagatcagcaaggtggagatgagctacgccttc
aagctgctgctcgacgagctgaaggctatgggaataaggccgtccctcaagataacggat
agggtgtga
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integrated database retrieval system
