Thermodesulfobacterium sp. TA1: F1847_01775
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Entry
F1847_01775 CDS
T06202
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
thet
Thermodesulfobacterium sp. TA1
Pathway
thet03030
DNA replication
thet03410
Base excision repair
thet03420
Nucleotide excision repair
thet03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
thet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F1847_01775 (polA)
03410 Base excision repair
F1847_01775 (polA)
03420 Nucleotide excision repair
F1847_01775 (polA)
03440 Homologous recombination
F1847_01775 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
thet03032
]
F1847_01775 (polA)
03400 DNA repair and recombination proteins [BR:
thet03400
]
F1847_01775 (polA)
Enzymes [BR:
thet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F1847_01775 (polA)
DNA replication proteins [BR:
thet03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
F1847_01775 (polA)
DNA repair and recombination proteins [BR:
thet03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
F1847_01775 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1847_01775 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DUF6240
HHH_2
Motif
Other DBs
NCBI-ProteinID:
QER41529
UniProt:
A0A5P1UX55
LinkDB
All DBs
Position
333565..336168
Genome browser
AA seq
867 aa
AA seq
DB search
MSERKEAVLIDGSSFIYRAYFAIPGYLATSRGLPTKAVFGVTQMIFKLLKEWNPEYIVWF
MDEKEPTFRHEVYERYKATRPKMPDDLKMQIPYIKKIIPALGIPLVSAPGYEADDLIASF
VKSFVFDTSTSPFLLNRVIIVAGDKDLYTLISDKVVIYDPIKETFLDQGKFLEKYGFPPE
VFPEFRALVGDRSDNIPGVPGIGEKTAKDLFIRFKNLTGVYENLSKIPSQKLRENLLKYR
DQVFTNLNLLKLHSEAPLPSKDLEFYRKKEPDFFALKSLFKELEFRKLLFELCLPEENSY
KLPTLKKASQDLIEKVRKDCWVSVLPVNLESVLFANLNSSEIFLALSEEEVYRGSLEVIK
KLAERHNRYVVYDYKNWLKTYQIFLPQPLDVKLAGYLLNPGLKSYELSGLFQEYIDLNLN
GLKGTPEELSGLKAVGLKRLGEDLLKRLEEEGLSYWFFKVEVPLSIVLSEMEKAGIKIDL
DYVKTLVRQYRERLKDLEEELFRLAGKRFNPRSSREVGEILFNKLNLPSLKKTPKSAVPS
TDAEVLEELAPLHPFAKLLLQYRTLQKILSTYLEALLKYAKPSTYRIHTEFNQTGTATGR
ISSQNPNLQNIPIKGEEGLAIRRVFIAEEGWWLCSLDYSQIELRILAHFSEDENLIRAFE
EGQDIHTFTASEVFGVSQDKVTPEMRRVSKVINFGIAYGMSPYGLSKELKISVKEAEGII
ERYFQRYPGVKRYIEEIIEFAKTYGYVKTLAGRKRYIPEVFSSDKNIRDLGFRMAVNTPI
QGSAADLIKVAMVALYQLLKQKKLKTQILLQIHDELLLEVPEEEIEVIKDLAPTVMEAPF
EFLGLNLRLKVPIKVNFAFGKSWADCK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaagaaaagaagcggtgcttatagatggttcatcttttatctatagggcttat
tttgcaattcctggttatttagctacttctagaggtctacccactaaggctgtttttggt
gtaacccagatgatctttaagcttttaaaagaatggaaccctgagtatatcgtttggttt
atggatgaaaaagaacctactttcaggcatgaggtttatgaaagatataaggctactcgt
cctaaaatgcctgatgatttaaagatgcagattccttatataaaaaaaatcattcctgct
ttaggtattcctttggtttcggctcctggatatgaagcagatgatctaatagcttctttt
gtaaaaagttttgtctttgatacttctacaagcccttttttgctcaaccgggtaattatc
gtagcaggagataaagacctgtatacccttatttctgataaggtggttatctatgacccg
ataaaagagacttttttagaccaaggtaagtttttagaaaaatatggttttcctcctgag
gtttttcctgaatttagagcattggtaggagatagaagcgataacatccctggggtccct
ggaataggagaaaaaaccgctaaggatctctttattaggtttaaaaacctaacaggagtt
tacgagaacctctcaaagattccctctcaaaaactaagggaaaatctcttaaaatatcga
gatcaggtgtttactaacctaaaccttcttaagcttcactctgaagctcctcttccttct
aaagatttagagttttatcgtaagaaagagccggatttttttgcgcttaaaagtctgttt
aaagaattagaatttagaaagcttcttttcgaactttgtttgccagaagaaaattcatat
aagttgcccacattaaaaaaagcctcccaagatttgatagaaaaggtgagaaaagactgt
tgggtgtcagttttacctgtaaacttagaaagtgtgctctttgctaacttaaactcctca
gaaatttttcttgccctttctgaagaggaggtttatagaggttccttagaagtaattaaa
aagttagccgaaagacataatagatatgtagtttatgattataagaattggttaaaaacc
taccaaatatttttacctcagcctttagacgtcaagttagctggctatcttttaaatcca
gggctaaagtcctatgaattatctggtttgtttcaagagtatatagatttaaacttaaac
ggtttaaaaggaacacctgaagaattatcaggattaaaagcggttggattaaaaaggtta
ggagaagatcttttaaaaaggttagaggaagaaggactatcttattggttttttaaggta
gaggtgccattaagcatagttttaagcgagatggaaaaagcaggtatcaaaatagacttg
gattatgtaaaaactttagttcggcaatatagggaaagattaaaagaccttgaagaggag
ctttttagattggcaggaaaaagatttaatcctcgttcaagtagagaagtaggggagatt
cttttcaacaaattaaaccttccctcgttaaaaaagaccccaaaaagtgcggtcccttct
acagatgcagaggtgcttgaagagcttgctccacttcatccttttgctaaacttcttctt
cagtatcgaacccttcaaaaaatattgagtacctatctagaggcccttttaaagtatgca
aagccttctacataccgtatccataccgagtttaatcaaacagggacagctacaggaagg
attagttcccaaaaccccaatttacaaaacattcctattaaaggcgaagaaggtttagcc
atccgaagggtttttatagcagaagagggatggtggctttgtagcttagactattctcag
atagaacttagaattttagcccatttttctgaagatgaaaacttgataagggcttttgaa
gagggacaggatatccatacctttactgctagcgaagtttttggggtttctcaggataaa
gtaactccagagatgagaagggttagtaaggtcatcaattttggtattgcctatgggatg
agtccctatggcctaagtaaagagcttaaaatttcggttaaagaggcagagggtattata
gaaagatattttcagagatatcctggagtgaaacgatacatagaagaaatcatagaattt
gctaaaacctatggttatgtaaaaaccttagccggtagaaaacgttatatacctgaagtt
tttagctctgataagaacataagggatttgggtttcaggatggcagtaaacaccccaatc
caaggttctgccgcagaccttatcaaagtagccatggtagccctttatcaactacttaaa
caaaaaaagctgaaaactcagatccttcttcagatccacgatgaactccttcttgaggta
cctgaagaagagatagaggtgattaaggatttagctcccacggttatggaagcccctttt
gagtttttaggccttaatctaagattaaaagtacctattaaggttaattttgcctttggt
aagtcttgggcagattgtaaatga
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