Thermoleptolyngbya sichuanensis: HPC62_22430
Help
Entry
HPC62_22430 CDS
T06607
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
theu
Thermoleptolyngbya sichuanensis
Brite
KEGG Orthology (KO) [BR:
theu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
theu03009
]
HPC62_22430 (rimO)
Enzymes [BR:
theu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HPC62_22430 (rimO)
Ribosome biogenesis [BR:
theu03009
]
Prokaryotic type
ribosomal protein modification factors
HPC62_22430 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QKD84574
UniProt:
A0A6M8BCJ7
LinkDB
All DBs
Position
5393027..5394388
Genome browser
AA seq
453 aa
AA seq
DB search
MSIKPVIAVSHLGCEKNRIDTEHMLGLLVQSGYQVDSNEELADYVIVNTCSFIQAAREES
VRTLVELAEANKKIVITGCMAQHFQKELLDEIPEAVAVVGTGDYHKIVEVIQRAEAGERV
QEVSAEPVYIADETTPRYRTTTEGVAYLRIAEGCDYRCAFCIIPHLRGNQRSRSIESIVA
EAKQLAVEGVQEIILISQITTNYGVDLYGEPRLAELLRALGEVEVPWIRMHYAYPTGLTP
KVIAAIQETPNVLPYLDLPLQHSHPEVLRAMNRPWQGQVNDGIIERIKTAIPDAVLRTTF
IVGFPGETEEHFQHLLAFVQRHEFDHVGVFTFSAEEGTPAFNLPNQLPQAVMDDRRDRLM
QVQQPISLRRNQAQVGRVVDVLIEQENPETNELVGRSARFSPEVDGLVYVQGDARLGSMA
TVEITGADVYDLYGQIADARTQLRGALSRVSAN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagcattaagccagttattgcagtttctcacctaggctgtgagaagaatcgaatcgac
acggagcatatgctggggctgctagtgcagtctggctatcaggttgattccaacgaagag
ttagccgattacgtcatcgtcaacacctgtagctttatccaggcggcccgcgaagagtcg
gtgcgaactctggtcgagctagctgaggctaacaagaagattgtaattacaggctgcatg
gcgcagcacttccagaaagaactgctggacgagatccccgaagcggtagcagtggtgggc
actggggactaccacaagattgtggaggtgattcagcgagcggaggcgggtgagcgggtt
caggaagtgtctgcggagccagtttacatcgcagatgaaaccacgccccgctatcgcaca
accactgaaggcgtagcctatctccgcatcgccgagggctgcgactatcgctgtgcgttt
tgcattattcctcacctgcgcggcaaccagcgatcgcgctcgatcgagtccatcgtcgcc
gaagcgaaacagctcgcggttgagggcgttcaggaaattatcctgatttcccagatcacc
accaactatggcgtggatctgtacggcgaaccccggctggcggaactgctgcgggcgctg
ggtgaggtggaagtgccctggattcggatgcactacgcctacccgacagggctgaccccc
aaggtgatcgcggcgattcaagaaacgcccaacgtgctgccctatctagatttgccgttg
cagcattcccatccggaggtgctgcgggcgatgaatcgtccctggcagggtcaggtcaac
gacggcatcatcgagcggattaaaaccgcaatccccgatgccgtgctgcgaaccacgttt
atcgtcggcttccctggcgaaacggaggagcattttcagcacctgctggcgtttgtgcag
cggcacgagtttgaccatgtgggggtgtttaccttttctgctgaagagggaacccccgcc
tttaacctgcctaaccaactgccgcaagccgtgatggatgaccggcgcgatcgcctcatg
caggtgcagcagccgatttccctgcggcgcaaccaggctcaggtagggcgtgtggtagac
gttctcatcgaacaggaaaatcccgaaacaaacgaactggtagggcgatcggcccgcttc
tctcccgaagtggacgggctggtctatgtccaaggcgatgctcggctgggatcaatggcc
acggtagaaatcaccggagccgacgtgtatgacctctacgggcagattgccgatgcccgc
acccaactcagaggcgcgctcagccgtgtctcagcaaactga
DBGET
integrated database retrieval system
