KEGG   Thermodesulfomicrobium sp. WS: TDMWS_08410
Entry
TDMWS_08410       CDS       T08730                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
thew  Thermodesulfomicrobium sp. WS
Pathway
thew00740  Riboflavin metabolism
thew01100  Metabolic pathways
thew01110  Biosynthesis of secondary metabolites
thew01240  Biosynthesis of cofactors
thew02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:thew00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    TDMWS_08410 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TDMWS_08410 (ribD)
Enzymes [BR:thew01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     TDMWS_08410 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     TDMWS_08410 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BDV00756
LinkDB
Position
complement(901462..902580)
AA seq 372 aa
MALRADHPHFMAKAAAVARLGFGHTAPNPCVGAVLVRDGNVVARGWHERFGGPHAEVNAI
AHARRRGEDLSRCTLYVTLEPCNHHGKTPPCTEAILAAGIRRVVVGTRDPNPQAAGGIER
LQAAGVEVIHGVLEDDCRDLIADFRLWQTSPRPYILLKLAQTLDGKIAPRPGIPGAISGL
RAQRWVHRLRSRVGAVLVGGGTLRADNPQLTCRHPRHQGPQPWAVVVTRRLPAADAPLTL
LRHTPERTIFLTSEAESRSQRATLLLDLGCRVYGLAEDATGIDLAAGLTLLRHEHGCHHV
LAEGGGTLAASLLATGLADEILLVVSPRILGDGAAPASFQGRTVHSMAEAISLRLAAIRT
LPPDLLLQLRPS
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggccctgcgcgctgatcacccgcattttatggccaaagccgcggccgtggcgcgcctc
ggctttgggcacaccgcccccaatccctgcgtgggcgcggtactggtgcgcgatggcaac
gtcgttgcccggggatggcatgagcgcttcggcggcccccacgcggaagtgaatgccatc
gcccacgcccgacgccgtggggaagacctgtcccgctgcaccctctacgtcaccctagag
ccctgcaaccaccacggcaaaaccccgccgtgcaccgaggccatcctcgctgctggcatc
cgtcgggtggtcgtcggcacccgcgaccccaatccccaggccgcaggcggcatcgagcgg
ctgcaggccgcgggagtcgaggtgatccatggcgtcctggaagacgactgccgggatctc
atcgcggattttcgcctatggcaaactagcccacggccgtacatcctactcaagctcgcc
cagaccctcgatggcaagatcgccccccggccagggattcccggggccatctccggcctg
cgggcccagcgctgggtgcatcgcctgcgcagccgtgtgggggccgtactcgtgggcggt
ggcaccttgcgggcggacaatccgcagctcacctgccggcacccccgtcaccaggggcct
cagccctgggccgtggtggtcacccggcgcctgccggcagcggatgcccccctgacgctg
ctacgtcacaccccggagcgcaccattttcctcacttccgaagcggagagccgctcccag
cgggcaacgctcctcctcgacttgggctgccgggtctacggcttggccgaagacgccaca
ggcatcgatcttgccgccgggctgacgcttttgcgccacgagcacggctgccaccacgtg
ctcgcggaaggaggcggcaccctggcggcgagtctgcttgccaccggccttgccgacgag
atcctgctcgttgtgagcccccggatactgggcgacggcgccgccccggcctcttttcag
gggcgcaccgtgcactccatggccgaggccatctcgctgcgccttgcggccatccgcacg
cttcccccggacctcctcctgcagctgcgcccctcctaa

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