Thermococcus sp. 5-4: CDI07_00990
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Entry
CDI07_00990 CDS
T05088
Name
(GenBank) RNA ligase
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
thh
Thermococcus sp. 5-4
Brite
KEGG Orthology (KO) [BR:
thh00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
CDI07_00990
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Gene cluster
GFIT
Motif
Pfam:
RNA_ligase
Lig_C
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
ASA76930
UniProt:
A0A1Z2TKF8
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Position
173279..174421
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AA seq
380 aa
AA seq
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MVSSSFRAMLLKLGVPEDRLAVLEGKGGVVEGEFEGIRYVRFRDSAKGFRRGTVVFENGD
VVLGFPHIKRVVQLERGIKRVFKNKPFHVEEKVDGYNVRVVKVRDRVLALTRGGFVCPFT
TERILDFVNEEFFRDYPNLVLAGEMAGPESPYIVEGPPYVKEDIQFFLFDIQENGTGRSL
PVEERLKLAEEYGIRHVETFGLYDRSKIEELHELIERLSRERREGIVMKTPDMKRIAKYV
TPYANINDIRIGSHIFFDLPHGYFMGRIKRLAFYLAEKHVKGEEFDEYAKALSKALLRPF
VESIHEVANGGEVEEVFTVRVKNISTAHRMVTHFERLGVKIHIEDIEDLRNGYWRITFKR
VYPDATREMRELWNGLAFVD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtaagctcaagctttagggcaatgcttctcaagctcggcgttcctgaggacaggctg
gccgttcttgagggtaagggtggagtggtggagggcgaattcgaaggcatcagatacgtt
cgctttcgcgattctgccaagggcttccggcgtggaaccgttgtctttgagaacggtgac
gttgtcctagggtttccccacataaagcgcgtcgtccagctggagagggggataaagagg
gtcttcaagaacaaacccttccacgtcgaggagaaggtggacggctacaatgtccgtgtc
gtcaaggttcgagacagggttctcgccctcaccaggggaggtttcgtctgccccttcacg
actgagaggatactcgacttcgtgaacgaggagttcttcagggattaccccaacctagtc
ctggccggcgagatggccgggcccgaaagcccgtacatcgtggaggggccgccctacgtg
aaggaggacatccagttcttcctctttgacatccaggagaatggaacggggaggagcctt
ccggtggaggagaggctcaagcttgccgaggagtacggcattcgtcacgttgaaactttc
ggcctctacgaccgttcaaaaattgaagagctacatgagctgatcgaaaggctcagccgg
gagaggagagagggcatcgtcatgaaaacgcctgacatgaagagaatcgcgaaatacgta
acgccatacgccaacattaacgacatccggataggttcccacatattcttcgacctgccg
cacggctacttcatggggaggattaaacgcctcgcgttctacctggccgaaaagcacgtt
aagggcgaggaattcgacgaatatgcgaaagccctcagcaaggccctcctccggccgttc
gtcgagagcatccacgaagtcgccaacggcggcgaggttgaggaggtcttcacggtgagg
gtgaagaacataagcaccgcccacaggatggtgacccacttcgagagactcggcgtgaaa
atccacatcgaggacatagaggatctcaggaacggctactggcggataaccttcaagagg
gtctatccagacgccacacgcgagatgagggagttgtggaacgggctggcgtttgtggat
taa
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