Thiomicrorhabdus sediminis: FE785_01435
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Entry
FE785_01435 CDS
T05983
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00330
Arginine and proline metabolism
thig00480
Glutathione metabolism
thig01100
Metabolic pathways
thig01110
Biosynthesis of secondary metabolites
thig04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
FE785_01435
09106 Metabolism of other amino acids
00480 Glutathione metabolism
FE785_01435
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
FE785_01435
Enzymes [BR:
thig01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
FE785_01435
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ribosomal_L32e
Motif
Other DBs
NCBI-ProteinID:
QCU89387
UniProt:
A0A4P9K586
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Position
335075..336277
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AA seq
400 aa
AA seq
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MINHTELEQLFAEETHPDVLQEFDRASLQELVEKHETPFMVLDLSEVEYQYKSLQAALPG
VKLFYALKSLSHPELIKRLKSIGGYFDLATIGEVELVESLGITGDRCIHTHPIKKDKEIK
RGLEFGCTRFVIDNMDELKKFIPYAGQAQLIIRVSFRSQQAVVDLSRKFGCSLEELPVLV
EFAQSHGIDVVGLSFHVGSQSLSPMTQVNAVRASVAAMKVMPHVKWQFLDIGGSFPVSYQ
EEVLPIDDFCAPLREALTEVPDGVDVFAEPGRFISAPSMIEVVSVVGKAKRGARMWYYLD
DGVYGGFSGQMFDHAQYPLAPLKPFDPTGEFLPSVLAGPTCDSIDVVAEDIELPELEVGD
ILIGKQMGAYTIASATEFNYYPKPKVVVVEDIFDPETEAL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgattaaccatactgagttagagcagctgtttgctgaagaaacacaccctgatgtgtta
caagaatttgaccgtgccagcttgcaggagctggtggaaaagcatgaaacaccgtttatg
gtgttggatttgagtgaggtcgaatatcagtataaatcgctacaggcggcattgcctggc
gtgaagctgttctatgcgctgaaatcgctttctcatcctgaattgatcaaacgtttgaag
tcgatcggcggctattttgacctggctacgattggcgaagtggaactggtcgaatcttta
gggatcaccggcgaccgctgtattcatacacacccgatcaaaaaggataaggagattaag
cgcggtctggagttcggctgtacccggtttgttatcgataatatggatgagctgaaaaaa
ttcattccttatgccggtcaagcgcagttgattattcgagtcagtttccgtagccagcag
gcggtggtcgatctgtcacgtaaattcggctgttcgctggaagaactaccggttttggtt
gagtttgcgcagtctcacggtattgacgttgtcggcttgtcgttccacgtcggttcacag
tcattatcgccaatgactcaggtcaatgcggtgcgtgccagtgtggcggcgatgaaagtc
atgcctcatgttaaatggcagtttttggatataggtggcagtttcccggtttcctatcag
gaagaagtgctaccgattgacgatttctgtgcgcctttacgtgaagcgcttacagaagtt
ccggatggtgttgacgtgtttgccgagccgggacgttttatctcggcaccgtctatgatc
gaggtggtatcggtagtcggtaaagccaagcgtggtgcgcgtatgtggtattacctggat
gatggcgtttatggtgggttcagtggacagatgttcgaccatgcacagtatccgttggcg
cctttgaagccgttcgacccgaccggtgagttcttaccgagtgtgttggcagggccgacg
tgcgacagtatcgacgtggtcgctgaagatatcgaactgccggaactggaggtcggtgat
attttgatcggtaagcagatgggggcttataccattgcttctgccaccgagttcaactat
tatccgaaaccaaaagtggtggtggtcgaagacatttttgacccggagaccgaagccctt
taa
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