Thiomicrorhabdus sediminis: FE785_07620
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Entry
FE785_07620 CDS
T05983
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
thig
Thiomicrorhabdus sediminis
Pathway
thig00730
Thiamine metabolism
thig01100
Metabolic pathways
thig01240
Biosynthesis of cofactors
thig04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
thig00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FE785_07620 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
FE785_07620 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thig03016
]
FE785_07620 (thiI)
Enzymes [BR:
thig01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
FE785_07620 (thiI)
Transfer RNA biogenesis [BR:
thig03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FE785_07620 (thiI)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
Rhodanese
QueC
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
QCU90510
UniProt:
A0A4P9K7R9
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All DBs
Position
complement(1670792..1672243)
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AA seq
483 aa
AA seq
DB search
MRFIVKLFPEIMIKGGPVKKRMITMLYENLRTLLHRIDGEIVVKRFWDKIEVECEDVFID
AVRNTLQKTPGVEQYLEVVQYQTGEDLELIGEKVALHHLQSISGKTFVVRAKRSGTHDVS
SFDLERFVGAYLYEKGEPAGVDLHNAQVKVEFELHQHTLNVITKRQAGLGGFPIGMQGDV
LSLMSGGFDSTVASYLTMKRGLKTHFIFFNLGGAAHEVGVKQVALYLWSQFGASHRVQFV
SVPFEEVVAEIFNATHESYMGVTLKRLMLMAAEKVADAMGIDALVTGESVAQVSSQTLRN
LAVIDEVSNKLVLRPLATMNKPEIVEIADKIGTREFAENMPEYCGVISKNPVTNASFERM
AKEAKRFDYSVLEKAVDQAVSLPVDKIIEDVNQQAPVEVVNHIGDEVVIDIRREAEVNHR
PLSVTADAEVLNIPFHELNRKFKALDQQKTYLLYCDKGVMSQLHAQYLRDAGFINVKVYR
PLA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgagatttattgttaagttatttccagaaattatgattaagggtgggccggttaaaaag
cgcatgattaccatgctttatgaaaacctgcgaaccctgttgcaccgtatcgatggcgag
attgtggtgaagcgtttctgggataagattgaagtcgaatgtgaggatgtctttattgat
gcggtgcgcaatactttgcagaaaacccccggggttgagcagtatctggaagtggtgcaa
taccagacaggcgaagacctggagttaatcggtgagaaggtggctttgcatcatttgcaa
agcattagcggtaaaacctttgttgtccgtgccaaacgtagcggaactcatgatgtcagt
tcatttgatctggagcgttttgtcggcgcttacctttatgaaaagggtgagcccgcaggt
gttgatctgcacaatgctcaggttaaagtcgaattcgagctgcaccagcatactttgaat
gttattaccaagcgtcaggctggactgggaggctttccaatcggaatgcagggtgatgtg
ctttctctgatgtctggaggattcgattcaacggttgccagttatttgacgatgaaacgt
ggcctgaaaacccattttatattttttaatctaggtggtgcggcccacgaagtcggcgtt
aagcaggtggctttgtatttatggagccagttcggtgcctcacaccgagtgcagttcgtt
tcggtgccttttgaagaagtggtggcggagattttcaatgcaactcatgagagttatatg
ggcgtcacattgaaacgcctgatgttgatggcggcggaaaaggttgccgatgcgatggga
attgatgccttggtgacgggggaaagtgttgcccaggtaagtagccagacattacgcaac
ctcgcggtgattgatgaggtgagtaataaattggttttaagaccactggcaacaatgaat
aagccggaaatcgtcgagattgccgataagatcggaacccgcgagtttgccgagaatatg
ccggagtattgtggcgtgatttcaaaaaaccctgtgactaacgcgtcatttgagcgtatg
gcaaaggaagccaaacgttttgattatagtgtgttggaaaaagcggttgatcaggcggtg
agtctgccggtggataagatcattgaagatgttaatcagcaggcgccggtcgaggtggtc
aatcacattggtgatgaagtcgttatcgatattcgccgtgaagcggaagtgaaccatagg
ccgttgagcgtaacggctgatgctgaggttttgaatattccatttcatgagttgaatcga
aagttcaaagcgctggatcagcaaaaaacttacctgctttattgtgataagggagtgatg
agtcaattgcatgctcagtatttacgtgatgccggttttatcaacgttaaggtttatcga
ccgcttgcataa
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