Thiomicrospira sp. S5: AYJ59_12705
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Entry
AYJ59_12705 CDS
T05796
Name
(GenBank) FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
thio
Thiomicrospira sp. S5
Brite
KEGG Orthology (KO) [BR:
thio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
thio03016
]
AYJ59_12705
Enzymes [BR:
thio01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
AYJ59_12705
Transfer RNA biogenesis [BR:
thio03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
AYJ59_12705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
NAD_binding_8
Pyr_redox_3
HI0933_like
Pyr_redox
FAD_binding_2
GIDA
Thi4
Lycopene_cycl
FAD_oxidored
FAD_binding_3
3HCDH_N
MurD-like_N
Shikimate_DH
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AZR83053
UniProt:
A0A3Q9I546
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Position
complement(2728980..2730971)
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AA seq
663 aa
AA seq
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MTDDKRLISSAQIEWTPEQVPKATHFDDIYYSVSDGLAESDYVFVQQNQLPERFAALRAG
EVFTVAETGFGTGLNFLQTLRAWFECAPKSAELQFISFEKFPLSVEDLAKAHGAFAELGT
LSQELCAVYPLRLPGWHEMSLFDGKVRLIVWFGDVLLGLPEFECSVDAWFLDGFAPSKNP
DMWQPALYTQMARLSHVQTTFATFTAVGEVRRGLQKAGFAVEKMPGFGRKREMCRGQLSQ
ERAFSSKAPWFASPDPSKSVKQRAVVIGAGLAGATVARQLAEQGWKVSVLEAGAQPGQQA
SGNLAGAIHPLVTADWNLRSQFYLRGFETTLKWLEPWLDNRQIIGELNGLMQLAVTDTLD
KRLKDSLQRVGLPPEFAVWCDAEQASARIGQTTEFEGLFFPKGGWVRPSTVVDTCLAHEN
IELRLHETVTDLVKNDQAWSIVTNQTQHESEVVVVATGALDEALNRQLGLPIRPVKGQVS
HLPGTAIQAPLHCTVTHRGYTVTGNLGEDAPYEGVTGATFEAPDTATELSEAAQSENREM
VVEALPNWWNHEAGLHGKIGFRPTTPDHLPLIGAVPPPEWMADAYLSQPHSQVPHRYPPQ
RYQTGLFVSNGHGARGLMSVFLGAEIIGRMVAGEMAVMPQHLYHAVHPSRFAIRAWRSGK
KSY
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgataaacgcctcatttcaagcgcacaaatcgaatggacgccggagcaggtg
cctaaagcgacgcatttcgatgatatctattattcggtcagcgatggcttggccgaatcc
gattacgtgtttgtgcagcaaaaccaactgccggaacggtttgccgctttgcgggcaggc
gaggtcttcacggtggcggaaaccggtttcggtaccgggttgaattttttgcaaacactg
cgtgcctggtttgaatgtgcgccgaaaagcgccgaactgcaatttatttcatttgaaaag
tttcctttgagcgttgaagaccttgcaaaagcccatggcgcgtttgcggaattagggacg
ctgtcacaagaattatgtgcggtttatccgctccggttgccgggttggcatgaaatgtcg
ttatttgacggaaaagtgcgtttaattgtttggttcggcgatgttttgctggggttgcct
gaatttgagtgctcggtggacgcctggtttttggacggttttgcgccgagtaaaaacccg
gatatgtggcaaccggctctctatacgcagatggcgcgcttgagtcatgttcaaaccacg
tttgccacctttacagccgttggcgaggtgcgccgtgggttgcaaaaggctgggttcgcg
gtggaaaaaatgcccggttttggacgcaaacgggaaatgtgtcgggggcaattgtcgcaa
gagcgtgctttctcatcgaaggcgccctggtttgcgtcgccggatccgagcaaatcagtc
aagcagcgcgctgtggtcattggtgccgggctggccggcgcaacggtggcacgccaattg
gcggagcagggctggaaggtcagtgtgttggaggcgggggcgcaaccggggcaacaggcg
tccggcaacctggccggcgcgattcaccccttggtgaccgcggattggaatctacgcagt
cagttttatttgagaggtttcgagaccactttgaaatggctcgagccttggctcgacaat
cgccaaatcatcggtgaactcaacggactgatgcagttggcggtgaccgatacgttggat
aaacgtctaaaagacagtttgcaacgggttggcctgccaccggaatttgcggtttggtgt
gatgccgaacaggccagtgcgcgaatcggtcaaacaacggaatttgaagggttgttcttt
ccaaaaggtggttgggtgcgcccgtcgacggtggtggacacctgtttggcgcatgaaaac
atcgaattgcgtttgcatgagacggtgacggatttggtgaaaaatgaccaggcctggtca
attgtgacgaatcagacccagcacgaatctgaagtggtggtggtggccacgggtgctttg
gatgaagcgttgaaccgtcagttggggttgccgattcgcccggtgaaggggcaggtcagt
catttgccagggacggctatccaggcaccgttgcattgcactgtgacgcaccggggctat
acggtcacgggcaatttgggggaggatgcaccttatgagggggtgaccggagccacgttt
gaagcgccggatacagccacggagctgtcggaagcggcgcaatcggaaaaccgtgagatg
gttgtggaagctttgccgaactggtggaatcacgaagccgggctgcatggcaaaatcggt
tttcgcccgacgacgccggatcacctgccgttgattggcgcggtgccgccgccggaatgg
atggcggacgcttatttgtcgcaaccgcatagccaagttccacatcgttatccgccgcag
cggtatcaaaccgggctgtttgtcagtaacggccatggtgcgcggggcttgatgtcggtt
tttctcggtgcggaaatcatcgggcggatggtcgccggtgaaatggccgtcatgccccag
catctctaccacgcggtacacccttcgcgctttgcgattcgagcttggcgaagcggtaaa
aagtcatactaa
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