Thiohalocapsa sp. PB-PSB1: N838_08885
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Entry
N838_08885 CDS
T07019
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00362
Benzoate degradation
thip01100
Metabolic pathways
thip01120
Microbial metabolism in diverse environments
thip01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
N838_08885
00624 Polycyclic aromatic hydrocarbon degradation
N838_08885
Enzymes [BR:
thip01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
N838_08885
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
QQO53456
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Position
2138603..2139253
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AA seq
216 aa
AA seq
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MQDHPKLPARRRLILAAVGLATATLPGIAAARIATPQQMRGPFYPDRMPLDQDNDLTRLM
GGDPSQGEITDLSGRVLDLDGMPITDALVEIWQCDANGRYIHSGDKGGRPRDPGFQGYGK
THSGSDGGYRFRTIKPVPYPGRAPHIHVAVTAPHRKRLVTQVYVDGARENSRDFLRSLLS
AEEQAAVTIPFRPSSDDARRLTARFDILMDRKYLSG
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatcaccccaaactccccgcacggcggcgtctgattctggctgctgtggggctc
gccactgccacgctgcccggtatcgcagcggcccgcatcgcaacgccgcaacagatgcgc
ggcccattctacccagaccgcatgccgctggatcaggacaacgatttgactcgtctgatg
ggcggtgacccctctcaaggcgagatcacagacctgagcggccgcgtcttggacctggac
ggcatgcccatcacagacgccctggtggaaatctggcagtgcgacgccaatggtcgctat
atccacagcggtgacaaaggcggccgaccgcgcgaccctggctttcagggctatggaaag
acgcattccggcagcgacggcggctatcgtttccgcaccatcaagccggtgccctatccc
ggccgtgctccacatatccatgttgcggtgacggcaccgcaccggaagcgcctggtgacg
caagtctacgttgacggcgctcgcgagaacagtcgtgacttcctgcgcagcctattatcc
gctgaggagcaggccgcggtaaccatcccgtttcgcccatccagtgacgacgccaggcgc
ctgacggcgcggttcgacatcctcatggatcggaaatacctgagcggatga
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