Thiohalocapsa sp. PB-PSB1: N838_25680
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Entry
N838_25680 CDS
T07019
Name
(GenBank) 4Fe-4S dicluster domain-containing protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
thip
Thiohalocapsa sp. PB-PSB1
Pathway
thip00020
Citrate cycle (TCA cycle)
thip00190
Oxidative phosphorylation
thip00650
Butanoate metabolism
thip01100
Metabolic pathways
thip01110
Biosynthesis of secondary metabolites
thip01120
Microbial metabolism in diverse environments
thip01200
Carbon metabolism
Module
thip_M00009
Citrate cycle (TCA cycle, Krebs cycle)
thip_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
thip_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
thip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
N838_25680
00650 Butanoate metabolism
N838_25680
09102 Energy metabolism
00190 Oxidative phosphorylation
N838_25680
Enzymes [BR:
thip01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
N838_25680
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_7
Fer4_9
Fer4_17
Fer4_10
Fer2
Fer4_18
Fer2_4
Fer4_2
Fer4
Fer4_6
Fer4_21
Fer4_16
Fer4_4
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QQO56249
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All DBs
Position
complement(6172237..6173253)
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AA seq
338 aa
AA seq
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MVTEKIIPKRESMQANIRIQRFTPGRDRSPYYDNFSLEVDTGTTILAALHAIKDEQDSSL
TFRAFCRSAICGSCTVRVNGRSVLACSTQLLPILKDFRKGSVTIEPMANLPVLRDLVVDI
DPILEKLSKMHPYLVENPERVPEALERESLMSQEELNEFDYMTDCILCGACYSACSSVKA
DGTYAGPLTIAKAYRFSVDVRDDFRGTRNQAAVDQGLWSCVQCRKCIRVCPKDTRPADSV
RRARKLTIDDGIQDTPGSRRAKAYTADIERYGQVNKPMLPVVVFGTRGWDAIEAAEAGLR
KHNIKPTREVCTLDGKDGAAKVFEKVREVEQQKQEDKP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggtaaccgaaaaaatcattcccaagcgggagagcatgcaggccaatatccgtatccag
cgatttacgccgggccgggatcgctctccatactacgacaatttcagcctcgaggtggat
accggcacgaccatacttgccgcattgcatgccatcaaagacgaacaggacagcagcctg
accttccgcgccttttgccgatcggcaatttgcggctcctgcacggtgcgggtcaatggg
cgctcggtgttggcttgttccacacaattgctgccgattctgaaggattttcgcaaaggc
tccgtcaccattgagccgatggcgaatctgccggtattgcgcgatctagtcgtggacatc
gaccccatcctggaaaagctttccaagatgcatccctatctggtcgaaaaccccgagcgc
gtccccgaggccctggaacgcgaatcgctgatgagtcaggaagaactcaacgagttcgac
tacatgaccgattgcattctctgcggcgcttgctattcggcttgttcgtcggtgaaagcc
gacggcacctatgctggaccattgaccattgccaaagcctaccgcttctcggtggatgtg
cgcgatgacttccgcggtacgcggaatcaggcggctgttgatcaaggactctggtcgtgc
gtgcaatgccgtaagtgtatccgggtctgcccaaaggacacgcgaccggcagacagcgtg
cggcgcgcgcgcaaattgaccatcgacgacggcattcaggacaccccgggctcgcgtcgc
gccaaggcctacacagcagacatcgagcgctacggccaggtcaataaacccatgcttccg
gttgtggtatttggtacacgcggttgggacgccattgaggcggccgaggccgggttgaga
aagcacaatatcaaaccaacgcgcgaggtttgcaccctggacggcaaagacggcgccgcg
aaggtgtttgaaaaagttcgcgaagttgagcagcagaaacaggaggacaaaccatga
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