Thermosynechococcus sp. NK55: NK55_01885
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Entry
NK55_01885 CDS
T02977
Symbol
rsmD
Name
(GenBank) rRNA small subunit methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
thn
Thermosynechococcus sp. NK55
Brite
KEGG Orthology (KO) [BR:
thn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thn03009
]
NK55_01885 (rsmD)
Enzymes [BR:
thn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
NK55_01885 (rsmD)
Ribosome biogenesis [BR:
thn03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NK55_01885 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_25
Methyltr_RsmB-F
PrmA
FtsJ
Methyltransf_31
MethyltransfD12
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
AHB87740
UniProt:
V5V2X4
LinkDB
All DBs
Position
complement(387234..387782)
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AA seq
182 aa
AA seq
DB search
MPLRISGQRSLKTLPGHSTRPTSAKVRQAIFNIWQGRLQGCGWLDLCAGTGAMGAEALLR
GAQWVVGIEQSPQACQVIRENWSALAQPHQHTLVLRGDVRQKLPQVPILQFEFIYFDPPY
NSDLYLPVLQLLWQEERLSPKGEIAVECRTKNPPDLEAILAIGWQQQRIKTYGSTMVIFL
SR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcctttgcgaatttcgggccagcgatcgctcaaaacccttcccggtcacagtacccgt
cccacaagtgccaaagttcgccaagcgattttcaatatctggcagggtcgcctccaagga
tgtggctggctagatttgtgtgctggtaccggtgcaatgggggcggaagccctactgcgc
ggtgcccagtgggtggttggtattgaacagtctccccaagcctgccaagtcatccgtgaa
aactggtcagcccttgcccaaccccatcagcacaccctggttttgcggggggatgtgcgc
cagaagctgcctcaagtccctattctccagtttgagtttatttactttgaccccccctac
aatagtgatttatatctacccgttctccagttgctttggcaggaggagcgtctcagtcct
aagggggaaattgccgttgagtgtcgcacaaaaaatccaccagatttagaggcgattctg
gcgatcggctggcagcagcaacgcattaaaacctatggcagcacaatggtcattttcttg
agccgttag
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