Thermococcus paralvinellae: TES1_0327
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Entry
TES1_0327 CDS
T03005
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
ths
Thermococcus paralvinellae
Pathway
ths03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ths00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TES1_0327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ths03021
]
TES1_0327
Enzymes [BR:
ths01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TES1_0327
Transcription machinery [BR:
ths03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TES1_0327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Auto_anti-p27
DUF5816
RUBY_RBDX
TF_Zn_Ribbon
Motif
Other DBs
NCBI-ProteinID:
AHF79721
UniProt:
W0I0Z3
LinkDB
All DBs
Position
305095..308451
Genome browser
AA seq
1118 aa
AA seq
DB search
MRGPTVVEVTPDDLWSVMESYWNEKGLVRQHLDSYNAFIEHGMQEVINEFGGIKPDIPNF
EVKFGKIRLGEPEFQEAQGQRKPLYPMDARIRNLTYAAPIYLEMIPVVNGIEQEPVEVRI
GELPIMLKSKACRLYGKSQEELIKLGEDPKDPGGYFIINGSERVIVSIEDLAPNRTLVEK
DERQEKVIAKCFSYRHGYRALIAVERRKDGLLYVSIPNVPGVVKFVYVMRALGLESDKEI
VDAISDDPRIQQVLFDNLEDASDIQTQEEALDHIGKKALPGQPREYRLRRAESIIDNNLL
PHMGVRPEDRIKKAYYLGMMALKVLELSLGLRGEDDKDHYANKRLRLAGDLLRDLFRVAF
SQLVKDMQYQLTKTYQRKGEKYVFENVQRFVRNSVRPDVLTERIEHALATGAWPGGRTGV
SQLLDRTNYMSTLSHLRRVTSPLSRDQPHFEARDLHGTHWGRICPTETPEGPNCGLVKNL
ALMAQITTAIPEEEVLKYLRKLGIVSIEERRPNPQVWRVYLNGVLIGTVEDGIALVNRIK
ADRRAGKISDVINVAYYDDVKEVYINSDDGRVRRPLIVVENGIPKLTKEHVEGIKNGTLT
WSDLIKMGVIEYLDAEEEENAYVATWPWEVTKEHTHLELMPAAILGIPASLVPYPEHNAA
PRNTYGAGMAKQSLGLGWANFRIRVDTRGHLLHYPQIPLVNSRIMKAVGFEERPAGQNFV
VAVLSYQGYNMEDAIVINKASIERGLARSTFFRTYEAEEKKYLGGQTDKFEIPDPTVRGY
RGEKYYRHLDEDGIIFPESKVNGKDVLVGRTSPPRFLEEQSGLGGIILQERRETSVAVRP
SEKGVVDKVIITETGDGTKLVKVTVRDLRIPELGDKFASRHGQKGVIGLIVPQEDMPWTE
SGIVPDLIVNPHGIPSRMTVGQLIEAIGGKVASLKGRRIDGTAFIGEPEEKLRKELEELG
FKHSGREIMYDGITGRRLEADIFIGVIYYQRLHHMVADKMHARSRGPVQVLTKQPTEGRA
REGGLRFGEMERDVLIGHGAAMLLVERLLEESDKTEVWVCENCGHLALEDKRRGQIYCPV
CGETEKISKVEMSYAFKLLLDELKAMVIRPALRLKERV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgagaggtccaactgttgttgaggttactccggatgacctttggagtgttatggaaagc
tattggaatgaaaaggggcttgttagacagcatcttgattcttataacgccttcatagag
catggaatgcaagaagtcatcaatgaatttggcggcataaaaccagatattccaaacttt
gaggtgaaatttggaaagattaggcttggagagccagaattccaggaggcacaaggccaa
agaaagccactttatccaatggacgctcgtataagaaacctcacttatgctgctccaata
taccttgaaatgattccagttgttaacggcattgagcaggaacctgttgaggtcaggatt
ggtgaacttccgataatgctcaagtcaaaggcatgcagactctacgggaagagccaggag
gagttaataaagcttggagaggatccaaaagatccaggtggttactttattatcaatggt
tcggagagagttattgtttctattgaggatttggcaccaaatagaactctagttgagaag
gatgaaagacaagaaaaggttattgcaaagtgtttttcatatagacacggttatagggct
ctaattgctgtggagagaagaaaagacggcttgctttacgtttctatacccaacgttcct
ggtgtcgttaagttcgtttatgtgatgagagctcttggtcttgagagtgataaggaaatc
gttgatgcaataagcgatgatccaagaatccagcaggttctcttcgacaaccttgaagat
gcaagtgacatccagactcaagaagaagctttagaccacattggcaagaaagcccttcca
ggccagccaagagagtaccgcttaaggagagcggagtcaataattgacaataatctgttg
ccccacatgggagttagaccagaggataggattaagaaagcatattatcttggtatgatg
gctttgaaggttctggagctttcacttggtctgagaggagaagatgacaaagaccactat
gcaaacaagaggttgaggcttgctggagatctgcttagagatctcttcagagttgcattt
agtcagctcgttaaggatatgcagtatcagttaactaagacgtatcaaagaaaaggtgag
aagtacgtttttgagaacgttcaaagatttgtgaggaattctgtgagaccagacgttctt
acagagagaattgagcatgcattagccactggtgcttggccaggaggaagaactggtgtt
agccagctcttggatagaacaaactacatgtcaacactctcacacttgagaagagttacc
tcacctctgagcagagaccagccgcacttcgaagcaagagacttgcacggaacccactgg
ggaagaatttgtccaactgaaacgccggaaggtccaaactgtggtcttgtcaagaactta
gcattgatggcccagattacaactgctatcccagaggaagaggttcttaagtacctgagg
aagctcggtattgtttcaattgaagagaggaggccaaacccacaggtctggagagtctat
ttgaacggtgtccttattggaacagttgaggatggcatagctttggtaaacaggattaaa
gctgacagaagggctggtaagattagtgatgtcataaacgttgcatattatgatgatgtt
aaggaagtttacataaacagcgatgatggtagagtgagaagaccccttattgtcgttgaa
aatggtattccaaagcttacaaaggagcacgttgaaggaataaagaatggaacactaaca
tggagcgatctcattaaaatgggtgtcattgagtacctcgatgcagaggaagaggagaac
gcctacgttgcaacttggccatgggaagtcacaaaggagcacacccaccttgagctcatg
cctgctgcaatccttggtattccggcatcactcgttccctatccagagcacaatgcagct
ccaagaaacacttacggagcaggtatggctaagcagagcttaggcttaggatgggctaac
ttcagaatcagagttgacaccagagggcacctcttgcactatccgcagattccgcttgtt
aactcaagaataatgaaggctgtcggttttgaagagagacctgctggtcagaactttgtt
gttgctgtcctcagctatcagggttacaacatggaagacgctattgtaatcaataaggca
tcaattgagagaggattagcgagatcaacattcttcagaacatacgaggctgaggaaaag
aagtatctcggtggtcagacagataagtttgaaattccagatccaactgttaggggatac
agaggagaaaagtactacaggcatcttgatgaggatggtataatcttcccagaatcaaag
gtcaacggtaaagatgtccttgtcggtagaacttcaccaccaagattccttgaagagcag
agcggattaggtggaataattctccaagagaggagagagactagtgttgccgtaaggccg
agtgagaagggtgttgttgacaaggtcataattactgagactggcgatggaactaagctc
gttaaagttaccgttagagacctcagaattccggagcttggagataagttcgcaagcaga
catggacagaagggtgttataggcttaatcgttccacaagaggacatgccatggacagag
agcggaatagttccagatttaatagttaacccacacggtattccatctcgtatgactgtc
ggacagctcattgaagcaattggtggaaaagttgcatcacttaagggaagaagaattgat
ggaacagcattcattggagagccagaagaaaaacttagaaaagaactcgaagagcttggc
ttcaaacacagcgggagagaaatcatgtatgatggaattactggaagaagattggaggca
gacatctttatcggtgtcatctattaccagaggcttcaccacatggttgccgataaaatg
cacgctcgttcaagaggtccagtgcaagtccttacaaagcaaccaactgaaggcagagca
agggaaggtggtcttagattcggtgaaatggaaagagacgttctcattggacacggtgct
gcaatgctccttgtagagcgtcttcttgaggagagtgataagacagaggtctgggtctgt
gaaaactgtggacatctagcgttagaagacaagagaagagggcagatatactgtccagta
tgtggagaaactgaaaagataagcaaagttgagatgagctatgcatttaagctgttgttg
gacgagcttaaggctatggtaataagacctgctttgagattaaaggagagggtgtga
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