Thermoflexus hugenholtzii: KNN16_12200
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Entry
KNN16_12200 CDS
T07254
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
thug
Thermoflexus hugenholtzii
Brite
KEGG Orthology (KO) [BR:
thug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
thug03009
]
KNN16_12200 (rimO)
Enzymes [BR:
thug01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KNN16_12200 (rimO)
Ribosome biogenesis [BR:
thug03009
]
Prokaryotic type
ribosomal protein modification factors
KNN16_12200 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QWK10119
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All DBs
Position
complement(2677374..2678774)
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AA seq
466 aa
AA seq
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MSRRAGRRYHLITLGCAKNAVDSASMAQLLEGAGYEATERPGRADVLIVNTCGFIEAARQ
ESLRVLRELAARKKKGQLLIAAGCLAQRWGARLVEEVPGIDGVIGTRRWMDILEFIEALR
GRSAPEPLFHIPDEGPIRREERGVLRAAVQGASAYLKIADGCRRPCAFCAIPLIKGPAVS
RPPEAIWAEARRLVDQGVRELILIAQDTTDYGHDLGMRDGLPTLIEGLVQRVPEVKWIRI
MYAYPGAVSDRLIEVMARYPQVAHYLDIPLQHGHPAVLRRMRRPANIEWVYRTVEKLRRA
MPDIALRTTFIVGYPGETEEEFEALLRFVRDLEFDRMGCFTYSYEPETPSARQPGHLPEE
VKQERYERLMAAQQPISLRKNQALVGKTLEVLIEGVGDGLSVGRTYRDAPEIDGLVLVEG
EWPVGQFLPVRITGAMTYDLIGVVVNSISSPDGSSRPPRATREPSR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcgcgccgggaggcgttatcatctgatcaccctgggctgcgccaagaacgcc
gttgactcggccagcatggcccagctcctggagggggccggctatgaggcgaccgagcgc
cccggccgggccgatgtcctcatcgtgaacacctgcggcttcatcgaggcggcccgccag
gaatccctgcgggtgttgcgggagctcgcggcccggaagaagaagggccagctgctcatc
gccgccggatgcttggcccagcggtggggggcccgtctggtggaggaggtgccggggatc
gacggcgtgatcggcacccgtcgctggatggacatcctggagttcatcgaggccctgcgc
gggcgctccgccccggagccccttttccacatcccggacgaagggccgatccgccgggag
gagcggggggtgctgcgggccgcggtgcagggggcgagcgcctacctgaagatcgcggac
gggtgccgccgcccctgcgcgttctgcgccattcccctgatcaaaggccccgcggtcagc
cggccgccggaggccatctgggcggaggcccgccggctggtggaccagggggtgcgggag
ctcatcctcatcgcccaggacaccacagattacggccatgatttgggcatgcgggatggg
ctgcccaccctgatcgaagggctggtgcagcgtgtccccgaggtgaagtggatccgcatc
atgtatgcttacccgggcgcggtctccgatcgcctgatcgaggtgatggcccgctaccct
caggtcgcccactatctggacatccccctgcagcatggccatcccgctgtgctgcgccgg
atgcggcgcccggcgaacatcgagtgggtgtatcgcaccgtcgagaagctccgccgcgcc
atgccggacatcgccctccgcactaccttcatcgtcggctatcccggcgagacggaggag
gagttcgaggcgctgctccgtttcgtccgggatctggagttcgaccgcatgggctgcttc
acttactcctatgagccggagaccccctccgcccgccagccgggccatctgcccgaggag
gtcaaacaggagcgttacgagcgcctgatggccgcccagcagccgatctccctgcgcaag
aaccaggcgctggtggggaagaccctggaggtgctgatcgaaggcgtgggggacggcctg
agcgtggggcgaacgtatcgggacgcgccggagatcgacgggctggtgctggtggagggg
gagtggcccgtcgggcagttcctccccgtccgcatcaccggggctatgacctatgacctg
atcggggtcgtcgtcaactccatctcctccccagacggctcttcccggcccccgagggcc
acgcgggagccgtcccggtaa
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