KEGG   Tepidibacter hydrothermalis: P4S50_06470
Entry
P4S50_06470       CDS       T09528                                 
Name
(GenBank) PolC-type DNA polymerase III
  KO
K03763  DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
Organism
thyr  Tepidibacter hydrothermalis
Pathway
thyr03030  DNA replication
thyr03430  Mismatch repair
thyr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:thyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P4S50_06470
   03430 Mismatch repair
    P4S50_06470
   03440 Homologous recombination
    P4S50_06470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:thyr03032]
    P4S50_06470
   03400 DNA repair and recombination proteins [BR:thyr03400]
    P4S50_06470
Enzymes [BR:thyr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     P4S50_06470
DNA replication proteins [BR:thyr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     P4S50_06470
DNA repair and recombination proteins [BR:thyr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     P4S50_06470
SSDB
Motif
Pfam: DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 DNA_pol3_a_NII Rv2179c-like tRNA_anti-codon DNA_pol3_a_NI RNase_H_2 DEDDh_C GIDA_C zf-RING_5
Other DBs
NCBI-ProteinID: WFD11716
LinkDB
Position
1452731..1457011
AA seq 1426 aa
MDSIKKYLEKIGVYNKLDKKYDNVLLSNIVYFKEDKIVYFYLESKEILNISEIRDIESKI
KNELTFFNDVKFRIRYKNIEDDVSVVINKYWNNIEFIMKSMVSSLTSTEKITWTYIDRCL
VINIQNEIIYKILELKKTAYSIKSMINEELGFDLSVRFNLESKFDMNLEEYITKKDEETD
SLLSNRIVASPKSETNEKKNNDHKVEKEETDNIYGKSITDPIEIIKNVTPETGRVCIKGE
VFDVENRELKGGRTLLTISITDYTSSIKCKLFLRENNKDGVVDNISKGSYLKIRGNALFD
NYSQELIVNISDIQKSKKKEKHDKSDKKRVELHLHTQMSAMDAITSVSKVVERAAKWGHK
AIAVTDHGIVQAFPEAMDASKKHGVKVLYGVEGYLVDDTNPVIKNPNKLPLSQTFVVFDL
ETTGFSNKNDKITEIGAVKIENFEIVDRFSVLVNPEKPIPYKVQELTGITNDMVKDERTI
EQVLPDFLDFIDDSVLVAHNAEFDIGFIRENCKRMSLDFNNIYADTINLARELLPQLKRY
KLNTVAKALKVSLENHHRAVDDAEATAEIFIKFLEMLQEKDATHLHQVNELFKVADFKKV
RSNHITILVKNYIGLKNLYKLISKSHMEYFYKTPRIPKSVLKEYKEGLLIGSACENGEVY
QSILKNKENYEIEEVLELYDYLEIMPLDNNKFMIEKEIVKDYEELKDINREIIKLGKKYD
KLVVATGDVHFIDPHDEVYRKILKHSQGFKSANEEVPLYFRTTDNMLDEFSYLGDEVARE
VVITNTNKIADQIDEIKPIPDETCTPVIEGSEEDLREMCYKKAHSMYGEKLPDVVEKRLE
RELTSIISNGYAVLYIISQKLVAKSLQDGYLVGSRGSVGSSFVATTSDITEVNPLPAHYR
CEKCLKSEFFETGSYTSGADLPDKECPVCKIPYIKDGHDIPFEVFLGFEGDKEPDIDLNF
AGEYQPNAHKYTEVLFGEGYVYRAGTIGTIADKTAYGFAKKYIDENEMKTTSAEINRLSK
GCTGIKRTSGQHPGGVMVVPHYKEIYDFSPIQYPANDSTSGVVTTHFDYHSISGRILKLD
ILGHDVPTIIRMIEDITGINATRIPLDDKKTMSIFTSTEALGVTSEEINCTIGSLGIPEF
GTKFVRQMLTDTQPTTFGELVRISGLSHGTDVWLNNAQDLVRDGVVTLKDVISTRDDIMN
YLIFKGLKPKLSFKIMEKVRKGKGLTPEDEEEMKNNDVPQWYIDSCNKIKYMFPKAHAVA
YVMMSVRIAYCKVYYPHSFYATYFTTKAEDFDANLVIKGKDEVIRKMKEIESLGNDVTAK
EKGMLTVLEVVVEMFARKIEISRVDLYKSDAKKFRIVDNKLLPPLIALQGVGGNAAINIA
KEREKEEFLSIEDLRKRTKISKTVVETLKSHGCIEGLPETNQLSLL
NT seq 4281 nt   +upstreamnt  +downstreamnt
atggatagtataaaaaaatatttagaaaaaataggagtgtataataaattagataagaaa
tatgataatgtgttattgagtaatatagtctattttaaagaagataagatcgtatatttt
tatttagaatcaaaagaaatactaaatatatctgagattagagatattgagagcaagata
aaaaatgaattaactttttttaatgatgtaaaatttagaataagatataagaatattgaa
gatgatgtaagtgttgttataaataaatattggaataatatagaatttataatgaagtct
atggtttcatctttaacatctactgaaaaaattacatggacatatatagatcgatgctta
gttataaatatacaaaatgaaataatatataaaatattggagttgaagaagactgcatat
tctataaaaagtatgataaatgaggaattaggttttgatttgagtgttagattcaatctt
gaaagtaaattcgatatgaatttagaagaatatataaccaagaaagacgaggaaacagat
agtttactttccaatagaatcgtagcgagtccaaaatctgaaacaaatgaaaagaaaaat
aatgatcataaggttgaaaaagaggaaacagataatatatatggtaaaagtattacagat
cctattgaaattattaaaaatgtaactcctgaaacaggaagggtatgtataaaaggagag
gtatttgatgtggagaatagagagttaaagggaggaagaactctattaactatttctata
acagattatacaagctctataaaatgtaaattatttttaagggaaaataataaggatggt
gtagtagacaatataagtaaaggatcttatttgaagattagagggaatgctttatttgat
aattattctcaggaacttattgtaaatatttctgatatacaaaaatcaaagaaaaaagaa
aaacatgataaaagtgataagaaaagggttgaactacatttgcatactcaaatgtctgct
atggatgcgataacctcagtatcaaaggttgttgaaagagccgctaaatggggacataag
gctatagcggttactgatcatgggatagttcaggcttttccagaggcaatggatgcatct
aaaaaacatggtgtcaaagttctttatggagttgaaggatatttagtagatgatactaat
cctgttataaaaaatccgaataaattgcctctaagtcaaacttttgtagtgtttgattta
gaaacaacaggtttttctaacaaaaatgataagataacagagattggtgctgtgaaaata
gaaaattttgaaatagtagatagatttagtgttttagtaaatcctgaaaaacctataccg
tataaagttcaggaacttacaggtataactaatgatatggttaaagatgaaagaactatt
gaacaggtgctgccagattttttagattttatagatgatagtgtgttggttgcccataat
gcagagtttgatataggttttataagagaaaattgtaagcgaatgtctttagattttaat
aatatatatgctgatactataaatcttgctagagagttacttcctcaacttaaaagatat
aaattaaatacagtagcaaaagctcttaaggtttctcttgaaaatcatcatagagcagtt
gatgatgctgaggctacagctgaaatatttataaagtttttggaaatgttacaagaaaaa
gatgcaactcatttacaccaagttaatgaattgtttaaagtagctgattttaaaaaagta
agaagtaatcatataactatattggttaaaaactatataggtcttaaaaatctatacaaa
ttaatatcaaaatcacatatggagtatttttacaagacacctaggatacctaaaagtgtt
ttaaaagaatataaggaaggacttttgataggatctgcatgtgaaaatggtgaagtgtat
caaagcatacttaaaaataaagaaaattatgaaatagaggaagtattagaactatatgat
tacctagagataatgccacttgataataataagtttatgatagaaaaagaaattgttaaa
gattatgaagaacttaaagatattaatagggaaattataaaacttggtaaaaaatatgat
aaattagttgtggcaacgggagatgttcactttatagatcctcatgatgaagtatataga
aaaatattaaaacattcacaaggatttaaaagtgctaatgaagaggttcccctttatttt
agaactacagataatatgttggatgaatttagttacttaggagatgaggtagctagggaa
gttgttataactaatacaaataaaatagcagatcaaatagatgaaataaaacctatacca
gatgaaacatgtactcctgtaatagaaggatctgaagaagaccttagagagatgtgttat
aaaaaggcccatagtatgtatggagaaaaacttcctgatgtagttgaaaagagacttgag
agagagttaacttctataataagtaatgggtatgcagttttatatataatatctcaaaaa
ctagttgcaaaatctttgcaagatggatatctagttggatcaaggggatctgttggttct
tcatttgttgctacgacaagtgatataacagaggttaatcctttgccagcacattataga
tgtgaaaaatgtttaaaatcggaattctttgaaactggaagttatacatcaggagctgat
ttaccagataaagagtgtcctgtttgcaaaataccttatataaaagatggacatgatata
cctttcgaagtgtttttaggatttgaaggagataaagaaccggatattgaccttaatttt
gcgggtgaatatcagcctaatgcacataagtatacagaagtactatttggggaaggatat
gtgtatagagctggaactataggaacgatagcagataaaacagcatatggatttgctaaa
aagtatattgacgaaaatgaaatgaaaactacatcagcagaaattaacagattatctaaa
gggtgcactggaatcaaaaggacatcagggcagcatccgggaggagtaatggttgttcct
cattataaagaaatatatgatttttctcctattcaatatccagctaatgattctacatct
ggagttgtaacaactcattttgattatcactctataagtggtaggatactaaagcttgat
atactaggacacgacgttccgactataataagaatgattgaggatataacaggaattaat
gctactagaatacctcttgatgataagaagacgatgtctatatttacatctacagaggct
ttaggagttactagtgaagaaatcaattgtactataggaagtcttggaatacctgagttt
ggaactaaatttgttagacaaatgcttacagatactcaacctacaacttttggagaactt
gttaggatatctggattatcacatggtacagatgtttggcttaacaatgctcaagactta
gttagggatggtgttgttacattaaaagatgttatatcaacaagagatgatataatgaat
tatcttatatttaaaggattgaagcctaagctttcatttaagataatggagaaggttaga
aaaggtaaaggcttaactccggaagatgaagaagaaatgaaaaataatgatgtgccacag
tggtatatagattcttgtaacaagattaagtatatgttcccaaaagcacatgcggtagct
tacgttatgatgtcagttagaatagcttattgtaaggtttattatccacattctttttat
gctacttattttactactaaagcggaagattttgatgctaatttagttataaaaggtaaa
gatgaagttattcgaaagatgaaagaaatagaaagtcttggaaatgatgttactgctaaa
gaaaaaggtatgttaactgtgcttgaggttgttgtagaaatgtttgcaagaaagatagaa
atttcaagagtagacctttataaatcagatgcaaagaaatttagaatagtagataataaa
ctattaccaccattaatagctcttcagggagttgggggtaatgctgctattaatattgct
aaagaaagagaaaaggaagaatttctttcaatagaagatttgagaaaaaggactaagatt
tcaaaaactgtagttgaaacattaaagagccatggctgtattgaaggcctacctgagacc
aatcaattatctctgctgtga

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