Thiomicrorhabdus immobilis: THMIRHAM_03290
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Entry
THMIRHAM_03290 CDS
T08420
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
tib
Thiomicrorhabdus immobilis
Pathway
tib00330
Arginine and proline metabolism
tib00480
Glutathione metabolism
tib01100
Metabolic pathways
tib01110
Biosynthesis of secondary metabolites
tib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tib00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
THMIRHAM_03290
09106 Metabolism of other amino acids
00480 Glutathione metabolism
THMIRHAM_03290
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
THMIRHAM_03290
Enzymes [BR:
tib01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
THMIRHAM_03290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Ribosomal_L32e
Motif
Other DBs
NCBI-ProteinID:
BCN92544
LinkDB
All DBs
Position
405229..406434
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AA seq
401 aa
AA seq
DB search
MDQQTQQFVETFAEQSHPDVLEQFDRASLEELVAKHETPFMVLDLEEVDYQYKSLQAALP
GVKLFYALKSLSHPELIKRLKSLGSYFDLATIGEVELVESLGIKGDQCIHTHPIKKDKEI
KRALEFGCNRFVVDNLEELKKFIPYAGQVELIIRVSFRSQQAVVDLSRKFGCALEELPVI
VELAQQNGIEVVGLSFHVGSQSLSPMMQVNAVRSSIAAMKVMNSVKWKFLDIGGSFPVSY
QEDVLPIADFCAPVVEALADLPEGVEVFAEPGRFISAPSMIEVISVVGKAKRGARTWYYM
DDGVYGGFSGQMFDHASYPIAPLKPFDATGEFLPSVLAGPTCDSIDVIAEDIELPELEIG
DILIGKQMGAYTIASATEFNYYPKPKIVVVEDIFDPETEAL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcaaactcaacaatttgtagaaacttttgcagaacaatctcaccctgacgta
cttgaacagtttgaccgtgcaagtttggaagagttggtcgccaagcatgaaacaccattt
atggtgttggacttggaagaggttgattatcagtacaagtctcttcaagcagcccttcct
ggggttaagttgttttacgcgttaaagtctttgtcacatcctgaacttatcaaacgattg
aagtcgttaggtagttatttcgatttggcaaccattggtgaggttgaactggtcgagtct
ttagggattaaaggtgaccaatgtattcatactcatcctattaaaaaagacaaagagatc
aaacgagctttagagttcggttgtaatcgttttgtagtggataaccttgaagaacttaaa
aagttcattccgtatgccggtcaggttgaactgatcattcgtgtgagtttccgtagccag
caagcggtagtggacttatcacgtaagttcggttgtgctttagaagagctgccggtgatt
gttgagcttgcacaacaaaacggtattgaagtggtgggcttgtctttccatgtgggttct
cagtcactttcgccaatgatgcaggtcaatgcagtgcgttcaagtattgcggccatgaaa
gtcatgaacagcgttaaatggaagttcttggatattggtggaagttttcctgtttcatac
caggaagacgttttacccatcgcggacttctgtgctccggtggttgaggctttagctgat
ttgccagaaggtgttgaggtttttgctgagcctgggcgttttatttctgcgccgtctatg
attgaagtgatttcagttgtgggtaaggcaaagcgtggtgctagaacttggtattacatg
gacgatggtgtttatggtgggtttagtgggcagatgtttgaccatgcctcttatccgata
gcaccgttgaaaccgtttgatgctacgggtgagttcttgcctagcgtattagccggcccg
acctgtgacagtatcgatgtgattgcggaagatatcgaattaccagagttggaaatcggt
gatatcttaatcggtaagcagatgggggcatataccattgcgtctgcaaccgagttcaat
tattatcctaagccaaagattgttgtggttgaggatatttttgatccggaaaccgaagca
ctgtaa
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