Thalassospira indica: DY252_09515
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Entry
DY252_09515 CDS
T05581
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
tii
Thalassospira indica
Pathway
tii00190
Oxidative phosphorylation
tii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tii00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
DY252_09515
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DY252_09515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tii03019
]
DY252_09515
Enzymes [BR:
tii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
DY252_09515
Messenger RNA biogenesis [BR:
tii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DY252_09515
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GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Nrd1-Seb1_dom2
Motif
Other DBs
NCBI-ProteinID:
AXO14431
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All DBs
Position
complement(1994076..1996223)
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AA seq
715 aa
AA seq
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MTHAAAVQSSAITIDSESRFINRELSWLAFNNRVLEEAQNTGHPLLERLRFLSISASNLD
EFYMVRVAGLVGQVRAGMTKVSQDGMSPSEQLRAITFDANQLMQDQQRVWRQLSSEMEKQ
GISVIDQGDLTQTDRKWLDGYFTREIFPTLTPLAIDPSHPFPFIPNLGFAIVMQLFDPAD
GHNMRGLIPVPQKIGRFLRLPGRNERYLPVEQAILLYLGKLFPGFDMIEHGFFRVIRDSD
VEIEEEAEDLVRVFKTALKRRRRGSIIRLKVNAAMPEDLLDFVIDELDVALEEVVKVDGL
LGVVDVKQLIDSDLHHDLLFSPYAARYPERVRDFGGDCFAAISKKDLVVHHPFEDFDVVV
QFLLQAARDPDVVTIKQTLYRTSENSPIVKALIAAAEAGKSVTAMVELKARFDEEANLRW
AADLERAGCQVVYGFLDWKTHAKVSLVVRRETHGLKTYTHFGTGNYHPITAKFYTDISFF
SCDPALGRDAASIFNFMTGYATPRSLEKIAIAPHTLRPTLLTHIDQEIENCKAGKPSGIW
AKMNSLVDPVVIDALYRASQVGVHIELIVRGICCLRPGVPGLSENIRVKSIVGRFLEHSR
IVVFANGAKLPSRKAKAFISSADWMPRNLNRRVETLVPVENPTCQQQIVEQIMIANLKDT
AQAWHLQPDGSYERCEAGENAFSSHKYFMTNPSLSGRGSALDQADPNVPVLQLDD
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgacacacgccgctgcagttcagtcaagcgcgatcaccattgattcggaaagccgcttc
attaaccgcgaattatcgtggctggcattcaacaatcgcgttcttgaagaggcccagaat
accggccacccgctgcttgaaagactgcgtttcctgtcgatttcggccagcaaccttgat
gaattctatatggtgcgcgtcgccggtctcgtcggtcaggtccgcgctggcatgaccaag
gtcagtcaggatggcatgagcccgtccgaacagctgcgcgccattacctttgatgccaac
cagttgatgcaggatcaacaacgcgtctggcgccagctcagcagcgagatggaaaaacag
ggcatctccgtcattgatcagggcgacctgacccagaccgaccgcaaatggctggatggt
tatttcacgcgcgaaatcttcccgacgctgaccccgcttgccattgatccgtcgcacccc
ttcccgttcatcccgaaccttggctttgccatcgtcatgcagctgtttgatccggctgac
gggcataatatgcgcgggcttattccggtaccgcaaaaaatcggccgtttcctgcgcctg
ccgggccgcaatgaacgttatcttccagtcgaacaggcgatcttgctctatctcggcaag
ctgttcccgggctttgatatgatcgaacacggtttcttccgcgtcattcgggactcggac
gttgaaatcgaagaagaagccgaagatctggtgcgcgttttcaaaaccgcactgaaacgt
cgccgtcgcggcagcatcatccgcctaaaggtcaatgcggcgatgcccgaagacctgctt
gatttcgtcatcgatgaacttgatgtcgcactggaagaagtcgtcaaggtcgatggcctg
ctcggcgttgttgatgtcaaacagctgatcgattctgatctgcatcatgacttgctgttt
tcgccctatgccgcacgttatccggaacgggtgcgtgactttggcggcgattgctttgcc
gcgatcagcaaaaaggatctggtggttcatcacccgttcgaagatttcgacgtggtggtt
cagttcctgttgcaagccgcccgtgatccggatgtggtcaccatcaaacagacactttat
cgcacatcggaaaacagcccgatcgtcaaggcgctgatcgccgcggccgaggctggcaaa
tccgtcaccgccatggtcgaactgaaagcccgctttgacgaagaagccaacctgcgctgg
gcggctgaccttgaacgtgcgggctgtcaggtggtctatggtttccttgattggaaaacg
cacgccaaggtgtcgctggtggtccgccgtgaaacccacggccttaagacctatacccac
ttcgggaccggcaactatcacccgatcaccgccaagttctataccgacatctcgttcttc
tcgtgcgatccggcactcgggcgtgatgcggccagcatctttaatttcatgaccggctat
gccaccccgcgctcgcttgaaaaaatcgcgattgcaccgcataccctgcgcccgaccctg
ctcactcacatcgatcaggagatcgagaactgcaaggccggcaagccatctggcatctgg
gccaagatgaacagtctggtcgatccggtggtgattgatgcgctttatcgcgcaagtcag
gttggcgttcatatcgaattgatcgtgcgcggcatttgctgcctgcgtccgggggtgccg
ggcctgtcggaaaatatccgcgtcaaatcgattgtcggccggttccttgaacattcgcgc
attgttgtctttgccaacggggcaaaactcccgtcgcgcaaggccaaggcgtttatttca
tctgccgactggatgccgcgtaacctgaaccgccgtgttgaaaccctggttccggttgaa
aatccgacctgtcagcaacagattgttgaacagatcatgattgccaacctgaaagacaca
gcacaggcatggcatctgcagccggacggctcctatgaacgctgcgaggcaggtgaaaat
gcattctcgtcgcacaagtatttcatgaccaacccgtcactttcgggccgcggaagtgcg
ctggatcaagccgacccgaatgttcccgtgctacagcttgacgactaa
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