Thermococcus kodakarensis: TK2135
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Entry
TK2135 CDS
T00226
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
tko
Thermococcus kodakarensis
Brite
KEGG Orthology (KO) [BR:
tko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tko03016
]
TK2135
Enzymes [BR:
tko01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
TK2135
Transfer RNA biogenesis [BR:
tko03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
TK2135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
PabTrmU54_TRAM_dom
MTS
Methyltransf_31
Met_10
Methyltransf_25
PrmA
Cons_hypoth95
Methyltransf_15
Methyltransf_23
TehB
N6_N4_Mtase
Methyltransf_11
UPF0020
Ubie_methyltran
CMAS
DOT1
Motif
Other DBs
NCBI-ProteinID:
BAD86324
UniProt:
Q5JHF7
LinkDB
All DBs
Position
complement(1914246..1915499)
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AA seq
417 aa
AA seq
DB search
MIRGTIERLSDEGLGTIRASRREILVPYTAPGDVVEVARWRRKKKKLIATDFKVIEESPI
RTEPKCPYFGVCGGCLLQHLPYEKQIEFKSEKLSRYIGTDVDVIPSPVIYGHRNRIDVVI
STGGIGFRRYGTWWDAVDIEECPVFGKTSRKVLKSLREFIEDEKPTLYEIRKNAGFLRYI
VMREGKFTGELMVNLVTSEGKLPESFPEYFPYATSIYWSVNRTESDVSYGDVERYWGEPF
IREKLDDVTYLIHPNSFFQTNSYQAVNLVRKVAELVEGEKVLDLYSGVGTFGIYLAKRGF
KVEGIEINPFAVEMAKKNAQINGVDAEFRVGEDKDVNSLSEYDTVVVDPPRAGLHPKLVR
KILKDRPETLVYVSCNPKTLSQNLKELSEGYKIEEAVGLDMFPHTPHVEAVLKLRKV
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
gtgataaggggaacaatagaaaggctcagcgacgaggggcttgggacaatcagggctagt
agaagggagatcctcgtcccgtacaccgctccgggcgatgtagtggaagttgcgcgctgg
aggaggaaaaagaaaaagctgatagcgacggattttaaggttatagaagagtccccgatc
aggactgaaccaaaatgcccgtactttggcgtatgtggcggctgtcttcttcagcatctc
ccctacgagaagcaaatagagttcaagagtgagaagctctccaggtatatcgggacggac
gttgatgtaatcccgtcccctgtaatctatggccacagaaacaggatagacgtcgttata
agcacagggggaatagggttcaggagatacggaacatggtgggatgccgttgacattgag
gaatgccccgtttttggaaagacaagccgaaaggttctgaagtccctgagggaattcata
gaagacgaaaagccgactttgtacgagataaggaagaacgcgggctttctgagatacatc
gtcatgagagagggcaagttcacgggcgaactcatggtgaacctcgtaacttcggagggc
aaactcccagagagctttccagaatacttcccgtacgcaacttccatctactggagcgtg
aacaggaccgagagcgacgtctcttacggagatgtagagaggtactggggtgagcccttc
ataagggagaagctcgacgacgtcacttatctaatccacccaaacagcttcttccagacg
aacagctaccaggccgttaacctcgtccgaaaagtggccgagctggtggaaggtgagaag
gttctcgacctctactccggcgttgggacgttcggaatctatcttgcgaagaggggtttc
aaagttgagggcatcgagataaacccgttcgcggttgagatggcaaagaaaaacgcccag
attaacggagttgatgcagaattccgcgttggtgaggacaaagacgttaacagcctctcc
gaatatgacacagtggtagttgatcctcccagggctggcctccaccccaagctcgttagg
aaaatcttaaaagacaggcctgagaccctcgtttacgtgtcctgcaatccaaagactctc
tcccaaaacctcaaagagctctcggaaggctacaagattgaagaggccgttggcctcgac
atgtttccgcacacgccccacgttgaggcagtcctcaaactcagaaaagtttga
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