Thiothrix lacustris: RCF98_02055
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Entry
RCF98_02055 CDS
T09396
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlc03016
]
RCF98_02055 (mnmC)
Enzymes [BR:
tlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
RCF98_02055 (mnmC)
Transfer RNA biogenesis [BR:
tlc03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
RCF98_02055 (mnmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
Pyr_redox
Pyr_redox_2
FAD_binding_3
GIDA
3HCDH_N
FAD_binding_2
Lycopene_cycl
ApbA
Pyr_redox_3
HI0933_like
FAD_oxidored
AlaDh_PNT_C
TrkA_N
DFP
Motif
Other DBs
NCBI-ProteinID:
WML91148
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All DBs
Position
complement(453165..454460)
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AA seq
431 aa
AA seq
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MSSIMLDLWQYVPRTYGNEPLGRQAKPNYTAAMQESPHLIPPWFALPEPYPIDHATIIGG
GVAGCQIAHALAKRGWQVTLLERHARLATEASGNRAGVLTPKMTAEAGWGETFYQQAFLY
AIEQIRQLEATGQVIEWSQCGALQLAHEPREAARQQALRERDLPPDFIRLLDQQAASAVA
GIPLPSGASYFPQAGWVNPASLCAALVAHPQITVRTLTDTTHLPSTGITIIASGREADQF
AETAFLPFLPVMGQTSQVAASHESELLKTTIGHEGYLTPAIAGQHVFGATFVRNVRDAVL
DSAADTTNFQQLAQYLPDFARSLQGVEGSHAAIRMTTPDRYPVVGALPDVDFYHQAYADL
RHGRASQCFPQARYQQGVFMLAGFGSRGLTTSGWCADLLAATITGDTLPVATMLYKQLHP
ARFLIRQMRRG
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
ttgagttctatcatgctcgacctgtggcaatacgttccccgtacctatggaaatgagcca
cttggtaggcaagccaaaccgaattatactgccgcaatgcaagaatccccccaccttatc
cccccgtggttcgccctgcccgaaccttaccccatcgaccatgccaccattattggcggt
ggtgttgccggttgccaaattgcccatgccttagcaaaacgcggttggcaagtcacactg
ctggaacgccacgcccgcctagcgacggaagcatccggcaaccgtgccggtgtgctcacc
cccaaaatgacagcagaagcaggctggggtgaaacgttttaccagcaagctttcttgtac
gccatcgaacaaattcgccaattggaagccaccgggcaagtgatcgaatggtcacaatgt
ggcgcattgcaactcgcacatgaaccgcgtgaagccgcgcgtcagcaagccctgcgtgaa
cgggatttaccgccagatttcatccggctacttgaccagcaagccgcatcggcagtcgca
ggcattccactgcctagcggtgcgagttatttcccgcaagccgggtgggttaacccagca
agcctgtgtgccgcgttggttgcacacccacagattacggtgcgaactctgactgatacc
acccacctaccgtcaaccggtatcaccatcattgcgagtgggcgtgaggcagaccagttc
gcggaaaccgctttcctgccctttttacccgtgatggggcaaaccagtcaggtagcggca
agtcatgagagcgaactgctgaaaaccaccatcgggcacgaaggctatttgacgcctgcg
attgctgggcaacacgttttcggggcaacctttgtgcggaatgtgcgcgatgcggtgttg
gatagtgccgctgataccaccaattttcagcaacttgcccaatacttgcccgacttcgcc
cgttccctgcaaggtgttgaaggaagtcatgctgctatccgcatgactacacccgaccgc
tacccagtggttggagcattgcccgatgtggatttctatcaccaggcgtatgcggatttg
cggcacggccgagcgagccaatgttttccgcaagcccgctaccagcaaggtgtatttatg
ctggcagggtttggttcgcgtggcttaaccacgagtggctggtgtgcagacttactggcc
gccacgatcactggggatacgttacccgtggcaaccatgttatataagcagttacacccc
gcccgttttctaatccgtcagatgaggcgtgggtag
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