Thiothrix lacustris: RCF98_04590
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Entry
RCF98_04590 CDS
T09396
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K26139
nitrite reductase [NAD(P)H] large subunit [EC:
1.7.1.4
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00910
Nitrogen metabolism
tlc01100
Metabolic pathways
tlc01120
Microbial metabolism in diverse environments
Module
tlc_M00531
Assimilatory nitrate reduction, nitrate => ammonia
tlc_M00615
Nitrate assimilation
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RCF98_04590 (nirB)
Enzymes [BR:
tlc01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.4 nitrite reductase [NAD(P)H]
RCF98_04590 (nirB)
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GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Fer2_BFD
Rubredoxin_C
Pyr_redox
NIR_SIR_ferr
Pyr_redox_3
NAD_binding_9
HI0933_like
GIDA
NAD_binding_7
3HCDH_N
AlaDh_PNT_C
FAD_binding_3
FAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WML91619
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All DBs
Position
complement(957147..959588)
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AA seq
813 aa
AA seq
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MHKENLVLIGNGMAGVRTLEELLKLAPDHYNITVFGEEPYGNYNRIMLSPVLASEKTIEQ
IMLNGEQWYIDNGITLYKGKKVAEINRARREVIATDGTIAPYDRLIIATGSVPFMLPLPG
ADKQGVIGFRDIKDVDTMLATASQYKNAVVIGGGLLGLEAANGLMKQGMNVSVVHLLDTL
MERQLDKPAAAMLQKSLEERGMTFLMEHATAEIIGAERVTAVRFKNGTEIPADLVVMAVG
IKPNTDLGKASGLYCERGIVVSDTMQTITDPKIYAIGECVQHRGIAYGLVAPLFEQAKVA
ANHLAKHGIARYVGTVTSTKLKVTGIELFSAGDFTGNEKTEDIVFKDAASGTYKKIVLQG
NQIKGAVLYGDTVDGSWYFQLMKDGTDVSAFRDTLLFGQHHLGDSGHNPETRVASLPDNA
EICGCNGVCKGDIVKAITEKKLFTLDDVRAHTKASASCGSCTGLVESLLAHTVGGDYSTT
PKTKPLCKCTDYTHDDIRHGIIQNKLKTMQAVREHFEWTTPDGCPSCRNSLNYYLLCAFP
TEYVDDAQSRFINERVHGNIQKDGSYSVVPRMFGGMCTSDQLRAIADVADKYEVPTMKVT
GGQRIDMFGIKKEQLPAMWKDLSDAGFVSGHAYGKAMRTVKTCVGSEWCRFGTQDSTGLG
VKLEELTWGSWMPHKFKLAVSGCPRNCAEATIKDIGVVCVDSGYELHIGGNGGIKVRVTD
LLCKVETEEQVLEYTGAFCQFYREDAHYLERTAPWIERVGLEKVKKAIVDDAAQRKALYE
RFLISQKPAQIDPWKARAEGAEADEFTPIMIEA
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagaaaatctggtactgatcggcaacggcatggcgggtgtccgcacccttgaa
gaactgctcaaacttgcccccgaccattacaacatcacggtattcggtgaagaaccttac
ggcaactacaaccgcatcatgctctcgccggtacttgccagcgaaaagaccatcgagcag
atcatgctcaacggtgaacagtggtatatcgacaacggcatcacgctatacaaaggcaaa
aaggtcgcagaaatcaaccgcgcccgccgcgaagtcatcgccaccgatggtacgattgcc
ccatacgaccgtctgattatcgccacgggttccgtccccttcatgctgccgctgcccggt
gctgacaagcaaggcgtgattggcttccgcgacatcaaagacgtggacaccatgctggca
accgccagccaatacaaaaatgccgtcgtcatcggcggcggcctgctggggctggaggcc
gccaacggcctgatgaaacagggcatgaacgtcagcgttgtccacctgctcgacaccctg
atggagcgccagctcgacaaacccgccgccgccatgctgcaaaaatcgctggaagagcgc
ggcatgaccttcctgatggaacatgccaccgctgaaatcatcggcgccgaacgtgtcacg
gcagtacgtttcaaaaacggcactgaaattcccgccgatctggtggtcatggctgtcggc
atcaaacccaataccgacctcggcaaagcttccggcttgtactgcgaacgcggcatcgtg
gtcagcgacaccatgcaaaccatcaccgacccgaaaatctacgcgattggtgaatgcgtg
caacatcgcggcattgcttacgggctggttgcgccgttgttcgagcaagccaaagttgcc
gccaaccacctcgccaaacacggcattgcccgttacgtcggcacggtgacatccaccaaa
ctgaaagtgaccggcattgaactgttttccgctggcgactttaccgggaatgagaaaacc
gaagacatcgtgttcaaggatgcggcttccggcacgtacaaaaaaatcgtgctgcaaggc
aatcaaatcaaaggggcggtgttgtacggcgataccgtggatggcagttggtatttccag
ctcatgaaagacggcacagatgtttccgcgttccgcgacactttgttgtttgggcaacat
catctgggcgattctgggcataaccccgaaacccgcgtggccagcttgcccgacaatgcc
gaaatttgcggctgtaacggtgtttgcaaaggcgacattgtaaaagccatcaccgaaaaa
aagctgttcacgctggatgacgtccgcgcccacaccaaagcctccgcgtcgtgcggctcg
tgtactggcttggtcgaatcgctgctggcgcacaccgtcggcggcgactattccaccacg
ccgaaaaccaagccactgtgcaaatgcaccgattacacccatgacgacattcgccacggc
attattcagaacaagctgaaaaccatgcaggcggtgcgcgagcacttcgagtggacaacg
ccggacggttgcccctcttgccgtaactcactgaattactacctgttgtgcgctttcccg
accgaatacgtggacgatgcgcaatcgcgtttcatcaacgaacgcgtccacggcaatatc
cagaaagacggttcgtattcggtcgtgccgcgtatgttcggggggatgtgtacctccgac
cagttacgcgccattgctgacgttgccgacaaatacgaagtgccgaccatgaaggtgaca
ggcgggcaacgtatcgacatgttcggcatcaagaaagaacagttgccagcgatgtggaag
gatttgagcgatgccggtttcgtctccggtcacgcttacggtaaagcgatgcgcaccgtg
aaaacctgcgtaggcagcgaatggtgtcgtttcggcacgcaagattccaccggcctcggc
gtgaaactcgaagagctgacgtggggttcgtggatgccgcacaagttcaagctggcggtt
tccggttgcccgcgtaactgtgcagaagccaccatcaaagacatcggtgtggtctgcgtc
gattccggttacgagctgcacattggcggtaacggcggtatcaaggtgcgcgtcaccgac
ctgctgtgcaaggtggaaaccgaagaacaggtgctggaatacaccggcgcgttctgccag
ttctaccgcgaagacgcgcactatctggaacgcaccgcgccgtggatcgagcgcgttggg
ctggaaaaagtcaaaaaagccatcgtggatgacgccgcccaacgcaaagccttgtacgaa
cgcttcctgatttcgcaaaagcctgcgcaaatcgacccgtggaaagcccgtgccgaaggt
gccgaagccgacgaattcaccccgatcatgatcgaagcctaa
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