Thiothrix lacustris: RCF98_06000
Help
Entry
RCF98_06000 CDS
T09396
Symbol
rsmD
Name
(GenBank) 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
tlc
Thiothrix lacustris
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlc03009
]
RCF98_06000 (rsmD)
Enzymes [BR:
tlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
RCF98_06000 (rsmD)
Ribosome biogenesis [BR:
tlc03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RCF98_06000 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
RsmJ
Methyltrans_SAM
Methyltr_RsmB-F
Met_10
PrmA
Methyltransf_25
MethyltransfD12
Methyltransf_24
Methyltransf_12
ETF
SAM_MT
Motif
Other DBs
NCBI-ProteinID:
WML91889
LinkDB
All DBs
Position
complement(1233966..1234523)
Genome browser
AA seq
185 aa
AA seq
DB search
MKNNLLRIIGGEWRSRKLRFADVPGLRPTPDRVRETLFNWLQQQVPGARCLDLFAGSGAL
GLEALSRGASEVVMVEKHPAAAKALRDNIALLGAQHAVLVNDDAFRYLRLLSEAEAFDLI
FLDPPFRKNLLEPVLDVLFAKTLLKPGGMIYLEQETEAVTDFSRFNLQVHRETTAGQVQS
LLLFS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacctgctgcgcattattggcggcgaatggcgcagccgcaagctgcgtttc
gctgatgtacccggtttgcgcccgacgccagaccgggtacgtgaaaccctgtttaactgg
ctgcaacagcaagtgccgggggcgcgttgcctggacttgtttgcaggcagcggcgcgttg
gggttggaagccttatcacgtggcgcgagtgaggtggtgatggtggaaaaacaccccgcc
gctgccaaagccttgcgcgacaatattgctttgttgggagcacagcacgcggtgctagtg
aatgatgatgccttccgttacctccggttgctgagcgaagccgaagcatttgacctgatt
ttcctcgatcctcccttccgcaaaaatttgctggaacctgttcttgatgtgttgtttgcc
aaaacgctgctaaaacccggcggcatgatctatctggaacaagaaacagaggcggttacg
gacttctcccgcttcaacctgcaagtgcatcgtgagactaccgctggacaagtgcaaagt
ttattgcttttttcgtga
DBGET
integrated database retrieval system
