Thiothrix lacustris: RCF98_13790
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Entry
RCF98_13790 CDS
T09396
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00260
Glycine, serine and threonine metabolism
tlc00630
Glyoxylate and dicarboxylate metabolism
tlc00785
Lipoic acid metabolism
tlc01100
Metabolic pathways
tlc01110
Biosynthesis of secondary metabolites
tlc01200
Carbon metabolism
Module
tlc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RCF98_13790 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RCF98_13790 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RCF98_13790 (gcvP)
Enzymes [BR:
tlc01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
RCF98_13790 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
SAPIS-gp6
Motif
Other DBs
NCBI-ProteinID:
WML90035
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Position
2818293..2821175
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AA seq
960 aa
AA seq
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MTTLYELEQHDDFVARHIGPSEADTAAMLEAVGADSLDALMQSTVPASILLTEPLAMEGS
RTEAETLAYLKQLAGQNRVAKSYIGMGYYDTFVPPVILRNVLENPGWYTAYTPYQPEISQ
GRLEGLLNYQQMITDLTGMDIANASLLDEATAAAEAMTLCKRSNKLKSNQFFVSTDVHPQ
TIDVLKTRAEHFGFELIIGNPATELAQHEVFGALLQYPGTTGEVGDLEALIKQAHAQKAL
VCVASDLMALVMLKAPGEMGADVVVGNSQRFGVPMGFGGPHAAFFATKDAFKRTMPGRVI
GVSIDSHGKQALRMAMQTREQHIRRDKATSNICTAQALLANMAGFYAVYHGPEGLKKIAG
RIHRLTSILAKGLQQKGVELGNAGWFDTLTLTIGEQQQGVLYQYALDAGINLRKQGAGQL
GISVDENKTRADIAELFDVLLGAGHGLDVEALDAAIAAEGFSGIPAGYARTSDFLTHPVF
NTHHSESEMLRYLKRLENKDFSLAHGMIPLGSCTMKLNATTEMIPVTWPEIANIHPFAPS
EQTVGYRAMIKELEDWLVEITGYDAISMQPNSGAQGEYAGLVAIRRYQESLGQGHRDVCL
IPSSAHGTNPASAAMVSLKVVVVECDANGNVDVADLRAKAEKHAANLSCLMVTYPSTHGV
FEQEIVEICGIVHQFGGQVYMDGANMNAQVGISKPGKMGSDVSHLNLHKTFAIPHGGGGP
GMGPIGVKAHLAPFLFSHVVTPPDGVALGNSAVSAAPYGSGAILPISWAYIKLMGAEGLK
RATEMAILNANYMMQRLSGYYPVLFRGANGRVAHECIIDIRPLKAASGIDESDIAKRLMD
YGFHAPTMSFPVAGTLMIEPTESEPKEELDRFCDAMIAIREEIRKVQEGVWPADNNPLVN
APHTLDDLVNAWERPYSQTEAVFPQGVSPTAKYWPTVNRIDNVYGDRNLVCSCPSVDSYR
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgacaactttgtacgaacttgaacaacacgacgacttcgttgcccgtcacattgggcca
tcagaggcggatactgccgcgatgctggaagccgtgggcgcggactcactggatgcgctg
atgcaaagcaccgtgccagccagcattttgctgactgagccgctggcgatggaaggcagc
cgcacggaagccgaaacactggcttacctcaagcaactggcggggcaaaaccgtgttgcc
aaatcgtacatcggcatggggtattacgatacgtttgtgccgccggttattttgcgtaat
gtgctggaaaaccccggctggtataccgcgtatacgccgtaccagccggaaatttcccaa
gggcggctggaaggcttgctcaattaccagcaaatgatcacggatttgacgggcatggac
attgccaatgcctcgttgctggacgaagcgaccgcagcggcagaagcgatgacgctgtgc
aagcgttccaataagctcaaatccaaccagttttttgttagtaccgatgtgcatccgcag
accattgacgtgttgaaaacgcgtgcggaacacttcggttttgaattgattatcggcaac
cctgccaccgagctggcacagcacgaagtcttcggtgccctgctgcaataccccggcacg
acgggtgaagtcggcgatctggaagcgctgatcaaacaggcacacgcgcaaaaagccttg
gtgtgcgtggcttccgatctgatggcgttggtgatgttgaaagcaccgggcgagatgggc
gcggatgtggtggtcggtaactcgcaacgtttcggcgtaccgatgggctttggtggccct
catgcggcgttttttgcgaccaaggatgcgttcaagcgcaccatgccgggtcgggtaatc
ggggtttccattgatagccacggcaagcaggcgttgcgcatggcgatgcagactcgtgag
cagcatattcgtcgcgataaggcgacttccaatatttgtactgcgcaagcgttgctggcg
aatatggcgggtttctacgcggtgtatcacggccccgaaggcttgaagaagattgcgggg
cgcattcatcgcttgactagcattctggcgaagggtttgcagcagaagggtgtggagctg
ggcaatgctggctggtttgatacccttacgttgacgatcggcgaacagcagcagggcgta
ttgtatcaatatgctttggatgctggtatcaacttgcgcaagcagggcgctgggcaatta
ggcattagcgtggatgaaaacaaaacccgcgctgacatcgctgagttgttcgatgtgttg
ctgggtgctggccacggtctggatgtggaggcgctggatgcggctatcgcggcggaaggt
ttcagcggtattccggcaggttatgcgcggactagtgatttcctgacccacccggtattc
aatacgcaccattccgaatcggaaatgttgcgttatttgaagcgtttggaaaacaaggat
ttctcgctggcgcatggcatgattccgttgggttcgtgcaccatgaagctgaatgcgacc
acggaaatgattccggtgacttggcctgaaattgccaatatccacccgtttgcgccgagt
gagcagactgtgggctatcgcgccatgatcaaggaattggaagattggttggtggaaatc
accggctatgatgcgatttcgatgcagccgaattcgggggcgcagggtgaatacgctggg
ttggtggctatccgccgttatcaggaaagtttggggcaggggcatcgcgatgtgtgtttg
attccgagttccgcgcacggtacgaatccggcatcggcggcgatggtgagcctgaaagtg
gtggtggtcgaatgcgatgccaacggtaatgtggacgtggcggatttgcgtgccaaagct
gagaaacacgcggctaacttgtcgtgcttgatggtgacttatccgtctacgcacggggtg
tttgagcaggaaatcgtcgagatttgcggcatcgtgcatcagttcggcgggcaggtgtac
atggatggcgcgaacatgaacgcacaggtgggcatttccaagccgggcaagatgggttcg
gatgtgtcgcatttgaacttgcacaaaacctttgcgattccgcacggcggcggtggccct
ggcatggggccgattggggtgaaggcacatttggcaccgttcctgttcagccatgtggtg
acaccaccggatggggtggcgttggggaatagtgcggtgtcggcggcaccttatgggagt
ggggctatcctgccgatttcgtgggcttacatcaagttgatgggcgcggaaggtttgaag
cgtgcgactgaaatggcgattttgaacgctaattatatgatgcaacgcttgtctgggtat
tatccggtgttgttccggggggcgaatgggcgggtggcgcatgagtgcattatcgacatt
cgtccgttgaaggcggcttcggggattgatgagtcggatattgctaaacgcttgatggat
tacggtttccacgcgcctaccatgtcgtttccggtggcggggacgctgatgattgagccg
actgaatctgagccgaaagaggagcttgaccgtttttgcgatgcgatgatcgcgattcgg
gaagagattcgcaaggtgcaggagggcgtgtggcctgcggacaataatccgctggtgaat
gcgccgcatacgctggatgatttggtgaatgcttgggaacgcccttacagccagaccgag
gcggtgttcccgcagggtgttagccctacggcgaagtattggcctaccgtgaaccggatt
gataatgtgtatggggatcggaatttagtgtgttcttgtccgagtgtggatagttatcgg
tag
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