Thiothrix lacustris: RCF98_16580
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Entry
RCF98_16580 CDS
T09396
Name
(GenBank) glutamine--tRNA ligase/YqeY domain fusion protein
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
tlc
Thiothrix lacustris
Pathway
tlc00970
Aminoacyl-tRNA biosynthesis
tlc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tlc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RCF98_16580
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tlc01007
]
RCF98_16580
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tlc03016
]
RCF98_16580
Enzymes [BR:
tlc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
RCF98_16580
Amino acid related enzymes [BR:
tlc01007
]
Aminoacyl-tRNA synthetase
Class I (A)
RCF98_16580
Transfer RNA biogenesis [BR:
tlc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RCF98_16580
Prokaryotic type
Other AARSs
RCF98_16580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA-synt_1c_C
tRNA-synt_1c_C2
Motif
Other DBs
NCBI-ProteinID:
WML90572
LinkDB
All DBs
Position
complement(3413282..3414955)
Genome browser
AA seq
557 aa
AA seq
DB search
MSEETSKPLNFIERTVKEDLDSGKTPAIRTRFPPEPNGYLHIGHAKSIWLNFGLAQKFGG
KCNLRMDDTNPEKEDEEYVEAIKADVQWLGYQWDGEVHYASDYFEQLYDWAVHLIEAGKA
FVCDLNAEEMRTYRGNLTEAGKDSPFRTRSIEENLDLFARMRAGEFADGSRTLRVKIDMA
SPNINLRDPVIYRIKRATHHQTGDKWCIYPSYDYAHGQGDALEGITHSVCTLEFEVHRPL
YDWFINNLPVPAQPHQYEFSRLNVNYTITSKRKLKQLVDEKHVDGWNDPRMPTVSGMRRR
GYTPKAINDFCEMAGVTKVEGVVDVGMLEFAIREDLNEISPRAMCVLRPLKVTLTNYPED
QVETMTAPVHPQHEEMGTREMPFCREVFIDQDDFLEEANKQFKRLVLGKRVRLRNSYVIE
ADEAIKDADGKIIEIRARVIEGTVGNNPEDGVKPKGVIHWVSARDNVDCEVRLYDRLFND
PAPDAGGKNFLDSINPGSLEILSGCKGEIGLAQATLEDRYQFEREGYFVLDSKYSTAEKP
VFNRVIGLKDTWEKAGA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaccagcaaaccccttaattttatcgagcgtaccgtcaaggaagacctc
gatagtggcaaaacccccgccattcggacgcggttcccccccgagccgaatggctatttg
cacattggccatgctaaatccatctggctgaacttcggtctggcacagaaattcggcggc
aagtgcaacctgcggatggatgacaccaacccggaaaaggaagacgaggaatacgttgaa
gccatcaaggctgacgtgcaatggctgggctaccaatgggatggcgaggtgcattacgcc
tccgattatttcgagcagttgtatgactgggcggtgcacctgatcgaagcgggcaaggcg
tttgtgtgcgacctgaacgctgaagagatgcgcacataccggggcaacctgaccgaagcg
ggcaaagatagcccgttccgcacccgttccattgaggaaaaccttgatctgtttgcgcgg
atgcgtgccggggaatttgccgatggcagccgcaccttgcgtgtcaaaatcgacatggca
tcgcccaatatcaacttgcgtgacccggtgatttaccgcatcaaacgcgcaacccaccac
cagaccggcgacaagtggtgcatttacccgtcctacgactacgcacacgggcaaggcgac
gcgctggaaggcattacacactcggtgtgtacgctggaatttgaagtacatcgaccgctg
tacgactggtttatcaataacctgcctgtccccgcgcaaccgcaccagtacgaattttcg
cgcctcaacgtcaattacaccatcaccagcaagcgtaagctcaagcaactggtggatgaa
aagcacgtcgacggctggaatgacccacgtatgcccaccgtgtcggggatgcgccgccgg
ggttacacccccaaagccatcaacgacttctgcgaaatggcaggcgtgaccaaggtcgaa
ggcgtggtcgatgtgggaatgctggaattcgccatccgcgaagacctgaatgagatttcg
ccgcgtgccatgtgcgtattgcgtccgctcaaagtcaccctgaccaattacccggaagac
caagtggaaaccatgaccgcgccggtacacccgcagcatgaggaaatgggtacgcgtgaa
atgccgttctgccgcgaagttttcattgatcaggacgacttcctcgaagaagccaacaag
caattcaagcgactggtcttgggtaaacgggtacgcctgcgtaacagctacgtgatcgaa
gccgacgaagccattaaggatgctgacggcaagatcatcgaaattcgcgcccgcgtgatc
gaaggcacggtcggcaacaacccggaagatggcgtgaaaccgaaaggcgtgatccattgg
gtatcagcgcgtgacaatgtggactgcgaagtacgcttgtatgaccgcctgttcaacgac
ccagcaccggatgcgggcggcaagaacttcctcgattccatcaaccccggcagtctggaa
atcctcagcggctgcaagggcgagattgggttagcgcaagcgacgttggaagaccgttat
cagtttgagcgtgaagggtattttgtgttggattccaagtactccaccgccgagaagccg
gtgtttaaccgggtgattgggttgaaggatacttgggagaaggctggggcttaa
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