Thiomicrorhabdus lithotrophica: NR989_06210
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Entry
NR989_06210 CDS
T09486
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tlh
Thiomicrorhabdus lithotrophica
Brite
KEGG Orthology (KO) [BR:
tlh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tlh03009
]
NR989_06210 (rimO)
Enzymes [BR:
tlh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
NR989_06210 (rimO)
Ribosome biogenesis [BR:
tlh03009
]
Prokaryotic type
ribosomal protein modification factors
NR989_06210 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
BpuJI_N
TRAM
Methyltransf_2
CLP1_P
YebF
Motif
Other DBs
NCBI-ProteinID:
WEJ61607
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Position
complement(1346420..1347793)
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AA seq
457 aa
AA seq
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MSKSQPTVGVISLGCPKATVDSERILTQLRTEGYQLTNSYQDADTVIVNTCGFIDSAVQE
SLDTIGEALEENGKVIVTGCLGAREDQITEIHPKVLAVSGPAAYEEVLTAVHNVIEPPKH
NPFVDLVPPQGIKLTPKHFAYLKISEGCNHRCTFCIIPSMRGDLVSRPVADVINEAKRLK
EAGVKELLVVSQDTAAYGVDVKYKTEFAEGRPTKTSMVGLSEALGEMGGVDEFWVRLHYV
YPYPNVEEVIPLMAEGKILPYLDMPLQHANPRVLKAMKRPGNVEKTLERINKWRQAVPDL
TIRSTFIVGFPGETDEEFQDLLDFLEAAQLDRVGCFQYSPVEGATANEIAEQVPDEIKQE
RFDRFMQLQQSISAKKMQAKVGKIMKVLVDDIDDKGAVARSMADAPEIDGMVFIDDAFHL
EPGQFVNVEIIGADEYDLWAKPIDEFVKQEASYIELG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatctcagccaacagtcggagtcattagtttagggtgtcccaaagcaacggtc
gatagtgaacgtattttgactcagttgagaactgaaggttatcagctaaccaatagctat
caagatgcggacactgtgattgtgaacacctgcggttttattgatagcgcggtgcaagag
tctttagacacgattggtgaagctctagaagagaatggtaaggttattgttactggttgc
ttaggtgccagagaggatcaaataacagaaatacaccctaaggttctagcggtatcaggt
cctgctgcttatgaggaagtattaacggcggtacataacgttattgagccaccaaaacat
aatccgtttgtagatttagtacctccacaaggaattaaattaacgccgaaacactttgct
tatctaaaaatctctgaaggctgtaaccatcgttgtacattctgcattattccatctatg
cgtggtgacttagtgagtcgccctgttgctgatgtaatcaatgaagctaagcgtctaaaa
gaggcgggagttaaagagctgttagttgtctcgcaggatactgcggcttatggggtggac
gtaaagtacaagaccgaatttgcagaagggcgtccaacaaaaacctcaatggtcggtttg
tctgaagccttaggtgagatgggtggagtagatgagttttgggtgagattgcattatgtt
tatccatacccaaacgttgaagaagtgattccgttgatggctgaaggtaagattttgcct
tatttagacatgccactacagcacgcgaatcctcgtgttttaaaagcgatgaagcgcccg
ggtaacgtagaaaaaacacttgaacgtattaataaatggcgtcaagcggtacctgattta
acgattcgttcaacttttattgttggttttccgggtgagacagatgaagagtttcaagac
ttattagactttttagaagctgcccaactagatcgtgttggctgctttcagtattcacca
gtagagggtgcgacagctaatgagattgctgaacaagtgcctgacgaaattaaacaagaa
cgttttgaccgctttatgcagcttcagcagagcattagtgctaaaaagatgcaggctaaa
gtcggtaagattatgaaggtcttggttgatgatattgatgataaaggagcggtagctcgt
tcgatggctgatgcgccagaaattgatggcatggtatttattgacgatgcttttcatctt
gaacctgggcaatttgttaatgtggaaattattggcgcagatgaatatgacttatgggcg
aagcctattgatgagtttgttaaacaagaagcttcatatattgaactaggttag
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