KEGG   Thiomicrorhabdus lithotrophica: NR989_06970
Entry
NR989_06970       CDS       T09486                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
tlh  Thiomicrorhabdus lithotrophica
Pathway
tlh00740  Riboflavin metabolism
tlh01100  Metabolic pathways
tlh01110  Biosynthesis of secondary metabolites
tlh01240  Biosynthesis of cofactors
tlh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:tlh00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NR989_06970 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NR989_06970 (ribD)
Enzymes [BR:tlh01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NR989_06970 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NR989_06970 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD DUF2529
Other DBs
NCBI-ProteinID: WEJ61753
LinkDB
Position
complement(1493917..1495065)
AA seq 382 aa
MTSSKYSDEDIIYMQQAIDLARKGLYSTKPNPAVGCVLVKNGQVIGQGWHQQAGQPHAER
LALAQAGINAEGATAYVTLEPCSHFGRTPPCADGLIEAKVAKVVVAMQDPNPLVASQGIE
RIEQAGIPVVLGVLESEARQINLGFIRKMEKQLPFVRLKIASSLDGRTAMANGESHWITG
EESRLEVHKMRARCGALITGIGTVLADDPSLTVRLTDQQLSDMNLTQENCHPIRVVLDPN
LSMPLNAKMLSLPGRTILMTSRETAERSPEIVEEIHAQGVEMVAVSAEDDHLDIESILHY
LAEEEQINDVMVESGAIVAGAFMQSGLVNELHCFIAPSLMGNEAKPMFVLPGLDSMDKKL
NLTIQSMDRFGDDARLILVPKD
NT seq 1149 nt   +upstreamnt  +downstreamnt
ttgactagctctaaatacagcgatgaagatattatctatatgcaacaagccattgatttg
gctagaaaaggtttgtattcgaccaagccaaatccagcagtaggttgtgtattggtgaag
aatggtcaggttattggtcaaggctggcatcagcaagcgggtcaacctcatgctgaaaga
cttgcgctggctcaggcaggcattaatgctgagggggcaacggcctatgtaactttggaa
ccttgttcacattttggccgaacaccaccttgtgctgatggtttgattgaggctaaagtg
gctaaagttgtcgttgctatgcaagaccctaacccattagtcgccagtcagggaatagag
cgtattgagcaggctggtattccagttgttttgggtgttttagagtctgaagctagacaa
atcaatttagggtttattagaaagatggaaaagcagttaccttttgttagattaaaaatt
gccagtagtttagatggaagaacagcgatggcgaatggtgaaagtcattggattacgggt
gaggaatcgcgtttagaagtccataaaatgcgagctcgttgtggtgctttaataacagga
attggtaccgttttagcggatgacccgagtctaactgtacgtttgactgaccaacagttg
tctgatatgaacttaacacaagaaaattgtcatcctattcgtgttgtattagatcctaat
ttaagtatgcctttgaatgccaaaatgttgagtttaccaggcaggacgatattgatgaca
tcacgtgaaactgctgaacgtagtcctgaaattgtcgaggaaattcatgcacaaggcgtg
gagatggttgctgtttcggcagaagatgaccatttagatatcgaatcaattttgcattac
cttgcagaagaagagcaaattaatgatgttatggttgaatcaggtgcaattgttgcaggt
gcatttatgcaatcaggcctggtcaatgaattacactgttttattgcgccttctttaatg
gggaatgaagctaaaccaatgtttgttttgccaggacttgatagtatggacaaaaaatta
aacttaacgattcagtctatggatcgttttggtgatgatgctagattgattctagttcca
aaggattaa

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