Thermococcus litoralis: OCC_06006
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Entry
OCC_06006 CDS
T02800
Name
(GenBank) DNA-directed RNA polymerase subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
tlt
Thermococcus litoralis
Pathway
tlt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tlt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OCC_06006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tlt03021
]
OCC_06006
Enzymes [BR:
tlt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OCC_06006
Transcription machinery [BR:
tlt03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
OCC_06006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
PG_binding_4
Motif
Other DBs
NCBI-ProteinID:
EHR78687
UniProt:
H3ZMZ7
LinkDB
All DBs
Position
complement(473055..474239)
Genome browser
AA seq
394 aa
AA seq
DB search
MVSSSTIKKLVESKASNLPERLKEELLEKLLTYNEKYKLKKAEIEAIIDEVVGEYEKALI
EPGEAVGTVTAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPIMTV
YLDEEHRYDSEKAREVARRIEGTTLESLARSMTLDILNMEFVVDVDPERLEKSGLTMEKI
QAKLERSFKSAEIEVDGNTLIIRMKKVKGVSTLRRLADKVKKHRLKGLSGVGKTIIRKEG
DEYVIYTEGSNFKQVLKVPGVDPTRTRTNNIHEIAEVLGIEAARNAIIEEITRTMQEQGL
EVDVRHIMLVADMMTLDGIVRPIGRHGVVGTKASVLARAAFEITVQHLLQAAERGEVDPL
NGVVENVLIGQPVPVGTGIVRLAMKLPIKKSIEE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggtatcaagctcaactattaaaaagcttgtagagagtaaagcctccaatctgccggag
agacttaaagaagagctcttggagaagctcctcacttataacgagaagtacaagctgaag
aaggcagaaattgaggcaataattgatgaagttgtgggcgaatacgaaaaagctctaata
gagcctggagaggctgtaggaactgttaccgcccagtcgattggagagccctccacacag
atgacacttaacacattccactatgcaggtgttgctgagattaacgttacccttggtctt
ccaagaatcattgaaattgttgatgcaagaaagaacccatcaactccaattatgacagtt
tatctcgacgaggagcatagatacgactcagaaaaggctcgtgaggttgcgaggagaatt
gagggaacaactctcgaaagccttgccagaagcatgacgcttgatatactcaacatggaa
ttcgtggttgatgttgacccagaacgccttgagaaaagcggtttaacaatggagaagatt
caagcaaagctcgaacgctcattcaagtcggcggaaatagaggttgatggaaacacattg
ataatcagaatgaaaaaggttaagggtgtttcaacattaagaagactcgccgataaagtt
aaaaagcatcgtctaaaaggactgtcaggcgtgggaaaaacaattatcagaaaagaggga
gacgagtacgtcatctacacagagggatcaaacttcaaacaggtgctcaaggttccgggc
gttgatccaacaagaacaaggacgaacaatatccatgaaatagctgaagtacttggcatt
gaggcggcaagaaatgctattattgaagaaataacaagaacgatgcaggagcagggtctt
gaagtagatgtcaggcatatcatgctcgtcgctgatatgatgacccttgatggtattgtg
agacctattggaaggcacggtgtggttggtacaaaagcaagtgtgctcgctagagctgca
ttcgagattaccgttcaacacttactccaagctgccgaaaggggagaggttgatcccctc
aacggtgtggtcgaaaacgtattaatcggtcagcccgttccagttggaacgggaatcgtt
aggctggcaatgaagttaccgattaaaaaatccatagaagagtag
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