Thalassospira lucentensis: R1T41_04065
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Entry
R1T41_04065 CDS
T09476
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
tlu
Thalassospira lucentensis
Pathway
tlu00540
Lipopolysaccharide biosynthesis
tlu01100
Metabolic pathways
tlu01250
Biosynthesis of nucleotide sugars
Module
tlu_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tlu00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
R1T41_04065 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tlu01005
]
R1T41_04065 (rfaD)
Enzymes [BR:
tlu01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
R1T41_04065 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
tlu01005
]
Core region
R1T41_04065 (rfaD)
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
Sacchrp_dh_NADP
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
WOI11759
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All DBs
Position
complement(749264..750250)
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AA seq
328 aa
AA seq
DB search
MLIVTGGAGFIGSNIVVALEERGETDIVVVDRLRDGIKWKNIAKRNLRDIVHPDDLPAFL
EAHNNDVDAIFHMGAISATTERDADKIVQNNYKLTTWLWEWCARHSSRLIYASSAATYGD
GKQGFDDSFDQADLAKLAPLNAYGWSKHATDRRFRTILDQNGFRPKQWAGLKFFNVYGPN
EYHKGGMRSVVSQMFDKLSAGETATLFKSHHPDYEDGGQLRDFVWVGDVVDIIMWLYDNP
QVSDLFNVGTGKARSFKDLALSVFSAIGKEPDIQYVPTPESIRDKYQYFTEANMAKLRAR
GYGANMTPLEEGVRQYIQDYLVTEDPFR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgtaaccggaggagccggatttatcgggtccaatatcgtggtggcccttgaa
gaacgcggcgaaaccgacattgtggttgttgatcgcctgcgcgacgggatcaaatggaaa
aacatcgccaagcgtaatctgcgcgatatcgtgcatccggatgatcttccggcgttcctt
gaagcgcataataacgacgttgacgcgattttccacatgggcgcgatttcggccacgacc
gaacgcgacgcggacaagatcgtacagaacaattacaagctgacgacatggctttgggaa
tggtgcgcacggcattcgtcacgtttgatctatgcgtcgtcggcggcgacctatggcgat
ggcaagcagggctttgacgacagtttcgatcaggccgatctggcaaaactggcaccgctt
aatgcctatggctggtcgaaacatgcaaccgatcgccggttccggaccatccttgatcag
aacggtttccgaccgaaacagtgggccggacttaaattctttaacgtctatggcccgaac
gaatatcacaagggcggcatgcggtcggtagtgtcacagatgtttgacaagctttcggcg
ggtgaaaccgcaacccttttcaaatcgcaccatcccgattacgaggatggcgggcagctt
cgcgattttgtctgggtcggggatgttgtcgacatcatcatgtggctttacgacaatccg
caggtcagtgacctgtttaatgttgggactggcaaggcgcgtagcttcaaggatctggca
ctttcggtgtttagcgcgatcggcaaggaacccgatatccagtacgtgccaacccccgaa
agcatccgcgacaaataccagtatttcaccgaggccaatatggccaagctgcgtgcgcgc
ggatacggagcgaacatgaccccgcttgaagaaggggtgcgtcaatatattcaggattac
ctcgtgaccgaggacccgttccgttaa
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