Treponema medium: DWB79_11505
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Entry
DWB79_11505 CDS
T07695
Name
(GenBank) MiaB/RimO family radical SAM methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tmed
Treponema medium
Brite
KEGG Orthology (KO) [BR:
tmed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmed03009
]
DWB79_11505
Enzymes [BR:
tmed01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DWB79_11505
Ribosome biogenesis [BR:
tmed03009
]
Prokaryotic type
ribosomal protein modification factors
DWB79_11505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
FAD-depend_C
Motif
Other DBs
NCBI-ProteinID:
QSH98359
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All DBs
Position
complement(2587027..2588547)
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AA seq
506 aa
AA seq
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MTKRFFLDQHGCAKNQVDGELLIGILTDKGWQKTVEPENADLIIVNSCGFIEPAKRESIE
AVITARTAYPQAKILLAGCLAERYGDIFKTDFEEADAFFGNGDLSQLPILIDRLFPDAPV
AQQQQSPNEHDQSVHSTEHSRPFLKPAQEGVCCGSRPELLNFPRSAFIKITEGCDNCCSF
CAIPLIRGSVRSRPLDSIINEIQGFVQQGYKEFNLIGQDLAVYETTTPLDKLSSRLNNNL
PTLPAQKRQGLSGLAQLLHAISGIEGTFSVRLLYIHPDHFPPDILPIMTADTRFLPYFDI
PFQSGSDPIIRAMNRCGSAETYLKLIENIRAAFRTAESPYGEAVIRTTFLTGFPGETQAD
FERTAAFLQAAQSLWSGAFAYSQEEGTKAADMKKQVPAKIAEQRKTALNELQLKITEQKL
AAFCGLEMDVLIEEIIPQEHNNEEENTQCCIALGRAWFQAPEVDGAVVVNFSQAQKDSEG
LPITAGSLVRVRITALRGIDLEADAL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
ttgactaagcgtttctttcttgatcagcacggatgtgctaaaaatcaagtagacggtgag
ctgcttatcggcatcttaaccgataagggttggcagaaaactgtcgaacccgaaaacgcc
gatctcatcattgtaaattcatgcggctttatcgaacctgcaaaacgtgagtcgattgaa
gccgttatcaccgcacgaacagcctatcctcaggcaaaaattttgctggcaggttgtttg
gcggaacggtatggcgacatctttaaaaccgattttgaagaagctgatgcctttttcggt
aacggagacttatctcagctccctatacttatcgaccggctgtttccggatgcgccggtt
gctcagcagcaacaatcgccgaacgaacatgatcaatcggttcattctaccgaacacagc
cgtccattccttaaacctgcgcaagaaggcgtatgctgcggttcgcgccccgaactgcta
aactttcctcgttccgcctttatcaaaattaccgaaggctgtgataattgctgttcattt
tgcgcgataccgctgatacgcggctcagtgagaagtcgcccgcttgacagtatcatcaat
gaaatacaggggtttgtgcagcaaggatataaagaattcaacctcatcgggcaagacctt
gcagtatatgaaaccaccacgcctctagataagctcagcagccggcttaacaataacttg
cccacattgccggctcaaaagagacaggggctttcgggattggcgcagcttttacacgca
atttccggtattgaaggaacattcagcgtccggttgctctatattcatcccgaccacttt
ccgccggatatcttgccgattatgactgccgacacccgcttcctcccctactttgatatc
ccctttcaatccggatccgatccgattatccgtgcaatgaaccgctgcggttctgccgaa
acctatctcaagttgatagaaaatatccgcgcagctttccgcacagcggaaagtccctac
ggggaggcggttatccgtactacttttttaacaggctttccgggagaaacccaagctgat
tttgaacggacggcagcctttttgcaggcagcacaaagcctctggtcaggggcattcgcc
tattcgcaggaagagggaaccaaggctgccgatatgaaaaaacaggtgccggcaaaaatt
gccgaacagcgcaagactgcccttaacgaactgcaattaaagattaccgaacaaaaactt
gccgctttttgcggactggaaatggacgttctcatcgaagagattatcccgcaagaacac
aacaatgaagaagaaaacacacaatgctgcattgcgctcggtcgggcatggttccaagcg
ccggaggtagacggtgccgtagtcgtaaatttttcccaagcgcaaaaagacagcgaaggg
ctgccgataacggcgggcagtctggttcgggtacggattaccgccctgcgcgggattgac
ctcgaagcggacgcactctaa
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