Talaromyces marneffei: EYB26_002856
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Entry
EYB26_002856 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EYB26_002856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_002856
Enzymes [BR:
tmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EYB26_002856
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
EYB26_002856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Nop14
DUF3672
Lipid_DES
Motif
Other DBs
NCBI-GeneID:
79162829
NCBI-ProteinID:
XP_054118136
LinkDB
All DBs
Position
2:complement(join(1377478..1378933,1378985..1379175,1379230..1381984,1382037..1382519,1382616..1382800))
Genome browser
AA seq
1689 aa
AA seq
DB search
MASFARPVASELASVDFSVYSSEDIKKISVKRIFNTPSLDSLHNPIPHSLYDPALGAWGD
HVCTTCRASSWSCPGHPGHIELPVPVWNVTFFDQVYRLLRAKCDYCHRLRMPRIEINAFA
CKLRLLQYGLVDQTAKIDMIGEDAQDAAVDADEKGNVDPQTKMELRNKFVKKCIREAQKQ
GDGDALFGGAKNPVSAEQRRELIKEFFKEAAKNPQKPCANCHYTSPGYRKDRYAKIFRKA
MTTKALVANQMAGMSAPNPVIVLQEEKRLLNKTKEQDKQNGTAIGDVAELHGAEEEVVRA
NAAIDQGSLAGGQVGGQQFVSAPEVHAAICLLFEKEREILNLVYSSRLGFKINPDMMFVR
NILVPPNRFRPPAQQGGQIMEAQQNTPFTQILKTCDLINTISHSRQTAETDGARMREYRD
LLQAIVTLQEQVNSLIDSDRGPGGMAAARAANGIKQILEKKEGLFRKNMMGKRVNYAARS
VISPDPSLETHEVGVPMVFAKKLTFPEPVTSFNFHELREAVINGPDKYPGASAIENESGQ
VVNLKFKNLEERTALANQLLAPSHAKMKGNRNKKVYRHLTTGDYVVMNRQPTLHKPSMMG
HRARVLPNERVLRLPYPNTNSYNADYDGDEMNMHFPQNTLARSELLMITDADRQYISSTD
GKPLRGLIQDHITVSTFLTSRDTFFEEEEYHELLYSCLRPENANTVTDRIQLVEPAFIRP
RRLWTGKQVISTVLKNIMPPNRRGLNLQGKSSTPGDRWGKGNEEDKVIFKDGELLCGILD
KKQIGASGGGFIDAIHEIYGNTIAGSLLSILGRLLTRYLNMRAFSCGIEDLRLTPEGDQK
RVEILKKAGELGKNVSLKYVTLDQNPAADQDAELKRRLEDVLRDDQKQSGLDSVYNSQTR
KLTSDITAGCLPHGLIKQFPWNQMQLMTTTGAKGSSVNANLISCNLGQQVLEGRRVPVMV
SGKTLPSYRAFETHPQAGGYVCGRFLTGIKPQEYYFHTMAGREGLIDTAVKTAKSGYLQR
CLIKGMEAVKVEYDSSVRDTANGGSVIQFIYGEDGLDVAKQVHLQNFSFLAQNYVSTMAQ
LNMNQDYHKLEKPEVTEWHKDAMKQVKRTGRLDAKDPVLAVYQPGGHFGSVSEAFSQALK
KYEDSNPDKLLKDKKAGIAGALSKKAFESVMHMKYLNSVIDPGDAVGIVAGQSIGSQTTQ
MTLNTFHLAGHSARNVTLGVPRLREIVMTASKKPMTPTMTVEVIEELSEEKGESFAKGIS
RLSIAEVIDSLQVRETTSGKDEKFKIYDIDMKFFDSKEYEKEYAITKRDLVRALQDEFLP
KFIKKISDEIKRRYDEQNLAGFSAAQPEIGVSIGTTERFEGAIRETQAGGAGDDDDDADE
DNEDDEEDAKRGQSKQNRDNQVSYEAPDDDEDIIRKEQDESDLEDDDEDNENKQKQDRKL
EDESESSDSSDDEDEMTEQAKLDRTDVEERTKEILGKYPEISIFKYNAQEGNSCFIRLQY
KISTPKLLVLPLVEDCARRAVIQAVQDIGSCLYTPADAENKEPAKIDIEGVNLLAMRDYQ
DYIKPHTIRTNSIHDMLIYYGVEAARSTIIREMSDVFSGHSITVDNRHLNLIGDVMTHSG
GFKSYSRNGLIRESNSPFSKSSFETSVGFMRDAVLERDFDDLKSPSSRIVVGRLGNVGTG
AFDIFAPVA
NT seq
5070 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttcgcccgtcctgtcgcaagtgagcttgcgtcagtcgacttctcagtctac
tcgtctgaagatatcaaaaaaatatcggtcaagcgcattttcaatacgccgtctttggac
tcacttcacaaccctatacctcactcactttacgatccggctttgggagcttggggagac
catgtctgtactacttgccgtgcgagctcttggtcgtgcccaggtcatcctggtcacata
gagctacctgttcccgtttggaatgtgacgttctttgatcaggtatatcgcctacttcga
gcaaagtgcgattactgtcaccgcctgcgaatgcctcggattgagattaatgcatttgcc
tgcaaactacgactccttcagtatggattggtcgaccagacggctaagatcgatatgata
ggtgaggatgcacaggatgccgcagtcgacgcagacgagaaaggaaatgttgatcctcag
acaaaaatggagctacggaacaagttcgtcaagaaatgcatccgcgaggctcagaagcaa
ggcgacggtgatgctctctttggaggagcaaagaacccagtttccgctgagcaacgaaga
gaattgatcaaggaattttttaaggaggccgctaagaatccccagaagccttgtgccaat
tgtcattatacatcgcccggttaccgaaaagaccgatacgccaagatctttcgcaaagcc
atgaccaccaaggcgttggttgcaaatcaaatggccggaatgtcagctcccaatcctgtc
atcgtccttcaagaggaaaaaagacttctcaataaaaccaaagagcaagataaacaaaat
ggtaccgctattggggatgttgccgagcttcacggagctgaagaggaagtcgtccgagca
aacgctgcgattgaccaaggctcactagctggtggtcaagtaggcggacaacagtttgtt
tcagcacccgaagtccatgccgctatatgcttgctgtttgaaaaagagcgggagatttta
aacttggtttacagctcacgacttggctttaagatcaaccccgatatgatgttcgtcaga
aacattctcgttccaccaaatcgttttcgtccacctgcacagcaaggaggccaaattatg
gaggcgcagcagaacacacctttcacgcagatcttgaagacatgtgatttgataaacacg
attagccactcaaggcaaactgcggaaaccgatggtgctagaatgcgagaatatcgtgat
ctacttcaggcaatagttactctccaggaacaagtcaacagtctcattgatagtgatcgt
ggccctggcggaatggctgccgcacgtgcggcaaatggcatcaagcagatcttggaaaag
aaagaaggtcttttcagaaagaacatgatgggaaagcgtgtcaactatgctgcccgaagt
gtcatttctcctgatcccagtcttgagacccacgaggtcggtgttcctatggtttttgct
aagaagttgactttccccgaaccagtcacatccttcaactttcacgagttgagagaggct
gtgatcaacggaccagacaagtaccctggagcttcggcgatcgagaacgagtcaggccag
gtcgtcaaccttaagtttaagaatcttgaagagcgtactgcacttgccaatcagttactt
gcaccatcacacgcaaagatgaagggcaaccgcaacaagaaagtatatcgacatcttact
actggcgattacgtcgtgatgaatcgtcaacctactcttcacaagccttccatgatggga
catcgtgcgcgagtcttaccgaatgagagagttctccggctgccatacccaaacacaaac
tcatacaacgccgattatgacggtgacgaaatgaacatgcacttcccgcaaaatacgcta
gctcgatctgagctcttgatgatcacagatgctgaccgtcaatacatatcttcgaccgat
ggaaagccgcttcgaggtttgattcaagatcatattacagtatctaccttcttgacgagc
cgagatacgttctttgaggaagaggaatatcatgaacttttgtatagttgtttgcgacca
gaaaatgccaacactgtcaccgaccggattcagttggttgaacctgccttcatccgcccg
cggcgtctttggactggcaagcaagtcatatcaacagtcctgaaaaacatcatgccgcca
aacaggagaggtctcaaccttcaaggaaagtcatctactcctggagacaggtggggcaag
ggaaatgaagaagacaaggtcattttcaaggatggtgagcttctttgtggtatccttgat
aagaaacagattggtgcctcaggaggtggtttcatcgacgccatccatgaaatttacggc
aatacgattgcaggcagcttattgagtattcttggacgacttcttacccgctacctcaat
atgcgagcgttcagttgtggtatcgaggatcttcgactaacgccagaaggagatcaaaaa
cgtgttgagattcttaagaaagccggcgaactcggaaaaaacgtttcattgaaatacgtc
acgcttgaccagaaccccgctgctgatcaggatgccgaactgaagcgtcgtcttgaagat
gtcttgcgcgatgatcagaaacagtcaggcttggatagtgtctacaactctcagacaagg
aagcttacctcggacatcacagctggatgtcttccacacggtcttatcaagcaatttccc
tggaatcaaatgcagctgatgactacaactggtgctaaaggttcaagcgttaacgcaaat
ttgatttcgtgcaatctcggacagcaagttttggaaggtcgtcgtgttccagtcatggtc
agcggaaagacgttaccatcttaccgggcgtttgagactcatccacaagctggtgggtat
gtctgtggtcgtttcttgacaggtatcaaacctcaagagtactatttccacaccatggct
ggtcgtgagggtcttattgatactgctgtcaagactgcgaaatcaggttacttgcagcgt
tgtttgatcaagggtatggaagccgtcaaggtcgaatatgattcttccgtgcgagatact
gccaatggaggatccgtcattcagttcatctatggtgaggacggtctagatgttgccaag
caggttcatctgcagaatttcagcttcttggcgcaaaactatgtctcgactatggcacaa
ctgaacatgaaccaagactaccacaagcttgagaagccggaggtcaccgagtggcacaag
gatgctatgaagcaggtcaagaggactggcaggttggatgcgaaggatccggttctagcc
gtatatcagcctggtggacattttggaagtgtttctgaggctttctcacaggctttgaag
aagtacgaggacagcaatccggacaaacttctcaaggacaagaaagcaggtattgctggt
gcgctaagcaagaaagcctttgaaagtgttatgcacatgaagtacttgaatagcgtcatc
gatcctggtgatgctgtcggtattgttgctggtcagtctattggatcgcaaaccactcaa
atgactctcaacacgttccatttggcaggtcacagtgcccgtaacgttactcttggtgtt
cctcgacttcgagaaattgtgatgacagcaagtaaaaagccaatgactcctaccatgact
gtagaagtcatcgaagagttgagtgaggagaaaggagaatccttcgcaaaaggaatcagc
agacttagcatagcagaagttattgattccctgcaagtgagagagacaacctctggcaag
gacgagaaattcaagatctatgatatcgacatgaagttctttgactccaaagaatacgag
aaagaatatgccatcacgaaacgtgaccttgtgagagcgcttcaggatgaattccttccc
aagtttatcaaaaagatcagtgacgagatcaagaggcgctatgatgagcaaaatctcgcg
ggattttcagctgctcagcctgaaattggtgtctctatcggcacaactgaacgtttcgaa
ggcgccatccgagaaacacaggcagggggtgcgggcgatgacgatgacgatgcggacgag
gataacgaggacgacgaagaagacgcaaaacgtggccagagcaaacagaaccgtgacaac
caagtcagctacgaagcaccggacgatgacgaggatataattagaaaagaacaagatgag
tccgaccttgaagacgacgacgaggacaatgaaaacaaacagaaacaagaccgaaaactt
gaagatgaatctgagtcatccgactcatccgatgacgaggatgaaatgactgagcaagca
aaactggatcgaactgatgtggaggagcgtactaaggagatcttgggcaaatatcctgaa
atcagtatcttcaaatataacgcccaggaaggtaattcgtgcttcattcgtcttcagtac
aagatcagcacgcccaagcttctggttctccctctcgtcgaagattgtgctcgacgtgcc
gtcatccaagctgtccaggatatcggttcatgcctttacaccccagccgacgcagagaat
aaagaacccgccaagatcgatatcgaaggtgtcaaccttctggctatgcgcgattaccaa
gattacatcaaaccgcataccatccgcacaaattcgattcacgacatgctcatttactac
ggtgtcgaagcagcccgctccaccatcattcgcgaaatgtcagacgtcttctctggtcac
agcatcaccgtcgataaccgccatttgaacctgatcggtgacgtgatgacacacagcggt
ggcttcaagtcctacagccgtaacggtctaatcagggaaagcaactcgcctttctcaaag
agttcctttgagaccagcgttggtttcatgagagatgccgttcttgagcgcgactttgac
gatttgaagagtcccagtagtcgtattgttgttggccgccttggtaatgtcggaactggg
gcgttcgatatattcgctcctgtggcataa
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integrated database retrieval system
