Talaromyces marneffei: EYB26_006917
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Entry
EYB26_006917 CDS
T06392
Name
(RefSeq) uncharacterized protein
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tmf
Talaromyces marneffei
Pathway
tmf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tmf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EYB26_006917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmf03021
]
EYB26_006917
Enzymes [BR:
tmf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EYB26_006917
Transcription machinery [BR:
tmf03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
EYB26_006917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
79166890
NCBI-ProteinID:
XP_054122165
LinkDB
All DBs
Position
5:join(1651275..1651366,1651439..1654609,1654658..1655384,1655437..1655769)
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AA seq
1440 aa
AA seq
DB search
MMQSEIKVGLGKAQVIDNVPKVIKELKFGALSDNDVISQAVVEISDRRFYDLERDRVVQE
NGPLDRRLGISGKMETCLTCGLGHKDCNGHFGHVKLVLPAFHIGYFKRVIGILQVICKEC
STILLPEAERRAFLKEMRRPRLDNLRRLQIAKRVVERCKKTRDCPRCGAVNGVVKKAGTA
ALKIVHEKFRHFNQSTSAKKVPPISKIVFDNSLAEARASNPDVDRFYKKAQDDLHALRVM
NLFKKITNADCELLGLDPTEVRPETFLWQYIPAPPNCIRPSVSQDGASNEDDLTAKLGDI
VQSNITLRNNLRKGAPVPTLMECWDYMTLQIAIYINGDVPGLKGEAGKPTRSLVSRLKGK
QGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPELVAKNMTYPEIVTRYNLEYLQKLV
RNGINKWPGAKKVIKKDSGLTISLKHSAKSLDTISKQLQIGDLVERHLVDGDIALYNRQP
SLHKLSILSHFVKVRPYRTFRMNECVCNPYNADFDGDEMNLHIPQTEEARSEAMELMGVK
NNLVTPKNGEPIIGAIQDFISAAYVLSSKDNFFDRRSFTQICLYMLGPETRFDLPPPAIL
KPQMMWTGKQVFNILMRPNKDDPVKVNIDAACREFKAPKDGQPKDLDPNDGWLVIRNSEI
MCGVMDKSTIGSGKKDNVFYIMLRDFGPPAAAEGMNRLSKLCARWFTNVGFSIGITDVYP
SERLVQTKNELVERAYAACDEVIAQYKAGKLEKLPGCDELQTMESQVSGILSKVRQQAGE
ECIKQLSKYNAPLIMATSGSKGSSINVSQMVAVVGQQIISSERVQDGFQDRTLPHFPKNA
RHPPSKGFVRNSFFSSLSPTEFFFHAMSGREGLIDTAVKTAETGYMSRRLMKSLEDLSAK
YDGTIRTSSASIVQFSYGGDDLDPVDMEGKAKPVHFDRTYNHAMAVTHNNNERGLQPSEI
RAITEELLSEERKRYVRKGLFGEDLPYKDDSDYGTDQLESARAFLDSIQEHIEKKAVAME
KAMDSALSDQEARMALDHVGKLSEGSLRYFIKSCLFKYEKAKIEPGHAVGAVGAQSIGEP
GTQMTLKTFHFAGVGNLALTQGVPRIKEIINASKEISTPVITCHLAIPHELHAARIAKGR
IEKTFLRDIIHYIRESWTDKEGYITVKLNWDTIENLQLELSLRQIKDAITSHRRFKGSDL
TVDVLRSHIKIRVDMDPSSKAGLSKTDIAATSADPYLRLKHLKRMLPDIQVLGHPQARRA
IIHSERGLNKLLVEGYGLRACMNTDGVEGVRTKTNNVMEMRAVLGIEAARETIINEMGEV
MKDMDIDPRHMHLLADIMTTNGEVLGITRFGMAKMRDSVLQLASFEKTADHLFDAGGTGR
TDRVEGVSECIIMGKTVSLGTGAMEVVRKLNFYEGHTGAKKTVFEDAWSEAHRETRRKKR
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagagcgaaatcaaagtcggcctggggaaggcccaggtcatcgataacgtgccg
aaagttatcaaagagttgaaatttggcgcattatcggacaacgatgttatcagccaagcc
gtcgtcgaaatctcggatagacggttctacgatctggagcgagatcgcgtcgttcaagaa
aatgggcccctagatcgcagactcggtattagcggtaaaatggaaacctgtctaacctgc
ggattgggacacaaggactgcaacggccatttcggacacgtgaaattagtacttccggct
tttcatattggatatttcaagagagttattggcatcttgcaggttatttgcaaggaatgt
tcgacgatactattgccagaggcggagcgtcgcgctttcctcaaagagatgcgtcggcca
cgactggataatctgcggcgtttacagattgcgaagagggtcgttgaacgctgcaagaag
acgcgagattgtcctcggtgcggtgcggttaatggtgtggtgaaaaaggctggtacagcg
gcgctgaaaatcgtgcacgaaaagttccgccactttaatcagtcgacttccgcgaaaaag
gttccgcctatcagcaaaatcgtgtttgataattcgttggcagaagctagagcttcgaac
ccggatgtcgacagattttacaaaaaagcccaagatgatttgcacgcgcttcgggttatg
aatctgttcaagaagattacgaatgcggactgtgagcttttgggtcttgatcctacagaa
gtccgtccagagacttttctttggcaatatatccctgctccgccgaactgtattcgtcca
tcggttagccaggatggggcgtctaatgaagatgatttgaccgcaaaacttggcgatatt
gtgcagagcaacataacactaagaaacaacttgagaaaaggagcaccggtgcctactctg
atggaatgttgggactacatgacgctacaaatagccatttatattaatggcgatgtgcct
ggtctgaaaggcgaggctggcaaacccactcgctcgctggtttctcgtcttaaaggaaag
cagggtcgattcagaggcaacttgtcaggaaagcgtgtcgacttttctggacgtactgtc
atttcgccagaccctaatcttcgaattgacgaggtcgcagttccggagttagtcgcaaag
aacatgacatacccagaaatcgtcactcgttacaacttggaatatttgcagaaattggta
cgcaatggtattaacaaatggcccggtgcgaaaaaggtcatcaagaaggatagtggattg
actatctcgttgaaacactcggcgaagagtttggacacaatatcgaagcagctgcagatt
ggagatctggtggaacgccatcttgttgacggtgatattgcactttacaatcgacagcct
tcccttcacaaacttagtattctttcacattttgtcaaggtccgtccgtataggacgttt
cgcatgaatgagtgtgtctgcaatccatacaatgccgatttcgacggtgacgaaatgaac
ctgcacattcctcaaactgaggaggctcgttctgaagcgatggaactcatgggtgtgaag
aataatctggtcacgccaaagaacggagagcccattattggagctatccaggatttcatc
agtgcggcatatgtattgagtagcaaggacaatttcttcgatcgaagatcttttacacaa
atctgtctatacatgcttggaccagaaacgcgattcgatcttccgcctccggctattctc
aagcctcagatgatgtggactggaaagcaagtgtttaacatccttatgcgtccaaacaaa
gatgatcctgtaaaggtcaatatcgatgccgcttgtcgagagttcaaggcaccaaaggat
gggcagccaaaggatctagatccaaatgacggttggttggtcattcgaaactctgaaatc
atgtgcggtgtcatggacaagagcactattggttctggaaagaaagacaacgtcttctat
attatgttaagagatttcggtccacctgctgcggctgaaggaatgaatcggctgtccaag
ctttgcgctcgctggtttactaatgttggattctcgattggtatcacagatgtatatcca
agcgagaggctggttcagacgaagaatgagctagttgagagggcctatgctgcttgtgac
gaggttatcgcccaatacaaggctggaaagctcgagaagttaccgggttgtgacgagctc
cagactatggagagccaagtatctggtattctgtccaaagttcgtcaacaagctggtgag
gaatgtattaagcaactcagcaaatacaacgcccctcttatcatggccacgtctggatcc
aagggttccagtatcaacgtatcacagatggttgctgttgtcggtcaacagattatcagc
agtgagcgtgtgcaagacggtttccaggaccgaacattgcctcacttcccgaaaaatgcc
cgccatccgccttcaaagggtttcgtgcggaacagtttcttttctagcttgtcgcctacg
gagttcttcttccacgccatgtctggtcgtgaaggtttgattgatactgcagtcaagact
gccgaaacaggttacatgtctcgtcgtttgatgaagtctcttgaagatttgtcggccaag
tatgacggtactattcgtacctcatctgccagtattgtgcagtttagctacggtggagat
gatctggatccggtggacatggaaggcaaagccaagcctgttcactttgatcggacatac
aaccatgccatggccgttacacataataacaacgagcgaggtctgcagccgtcagaaatc
agggctatcaccgaggaattactgtctgaggaacgaaagagatatgttcgcaagggtctt
ttcggcgaagatcttccttataaggacgacagcgactacggtactgatcaattagagagt
gcacgtgccttccttgactcaatccaggagcatattgagaaaaaggcagtcgctatggaa
aaagcaatggacagcgctctttcagatcaagaagctcgaatggctcttgaccatgttgga
aagctgtcggagggatcattgagatatttcatcaagtcttgtctgttcaaatatgagaag
gccaagattgagccgggacatgctgtgggcgctgttggagcgcagtccattggagagcct
ggtactcagatgaccctgaaaactttccattttgctggtgtcggtaacttggcacttaca
cagggtgttccccgtattaaagaaattatcaacgcttcgaaagaaattagtactccagtc
attacttgtcaccttgccatcccgcatgaacttcacgcagcgcgtatcgccaagggcaga
atcgaaaagacatttttgcgtgatattatccattacatacgagagtcctggacagacaag
gaaggctacattacagtcaaactcaactgggacacgatcgagaacctacagctcgaattg
tccctcagacagatcaaggatgccatcacaagtcaccgccgcttcaagggcagcgatctt
acggtcgacgttcttcggtcgcacatcaaaatccgagtggacatggacccgagcagcaag
gcaggattgagtaagactgatattgcagcgactagtgcagacccatatcttcggttgaag
catctcaagcgtatgctgccggatattcaagtattgggacatccgcaggccaggcgtgct
attatccactctgagcgcgggcttaataagttgctcgttgaaggatatggcctacgagca
tgtatgaacaccgatggagttgagggagtgaggacaaaaaccaacaacgtcatggaaatg
cgggctgtgctgggtatcgaggcggcgcgagagacgattatcaatgaaatgggtgaggtc
atgaaggatatggacattgatccacgacacatgcaccttctcgcagatatcatgactaca
aacggcgaagttttggggattacccgtttcggtatggccaaaatgcgcgattcagttcta
cagcttgcatccttcgagaaaactgccgatcatctcttcgacgccggcggaacaggtcgt
acagaccgcgtggagggtgtatcagagtgtattattatgggcaagaccgtttccctcggt
acgggcgcgatggaagtcgtgcgcaaactcaacttttatgagggccatacgggggcgaag
aagacggtgttcgaggatgcgtggtctgaggcccatcgtgagacgaggaggaaaaagcgg
tag
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integrated database retrieval system
