KEGG   Thiomicrospira microaerophila: JX580_04080
Entry
JX580_04080       CDS       T08259                                 
Name
(GenBank) CpaF family protein
  KO
K02283  pilus assembly protein CpaF [EC:7.4.2.8]
Organism
tmh  Thiomicrospira microaerophila
Pathway
tmh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tmh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    JX580_04080
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tmh02044]
    JX580_04080
   02035 Bacterial motility proteins [BR:tmh02035]
    JX580_04080
Enzymes [BR:tmh01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     JX580_04080
Secretion system [BR:tmh02044]
 Type II secretion system
  Tight adherence (Tad) export apparatus
   JX580_04080
Bacterial motility proteins [BR:tmh02035]
 Pilus system
  Pilus assembly proteins
   JX580_04080
SSDB
Motif
Pfam: T2SSE ABC_tran FtsK_SpoIIIE AAA_2 AAA_22 DEAD Zeta_toxin AAA_7 Mg_chelatase Dynamin_N AAA_28 Sigma54_activ_2 AAA_19 AAA_29 PCMT AAA_16 G-alpha AAA_23 AAA_33 Microtub_bd SWI2_SNF2 nSTAND3 SRP54
Other DBs
NCBI-ProteinID: UQB43442
LinkDB
Position
842912..844324
AA seq 470 aa
MNLKDRFNLNRHAQEDVAGSVKPKVQAKAVSMQTKPEPIRAPLIQNNNFLTIKARCQKQA
AEDEAFYRADSQETRQELRPRLEELIRKESQSLGYPLSDVEVKQLSSELLDEIYGLGPIE
SLMADPSVSDILINGHNQVYVERKGRIELTDVCFISEEHLRNKVDRMLYVTGRRVDERSP
LVDARLSDGSRINVIIPPLAVDGIMVSIRRFPKESLRAKDLINFGAMVEPMFQFLDAAVK
SGLNILVCGGTGSGKTTTLNMLSGLIPEDERIVTIEDSAELRMQQEHVVRLETRPPNAEG
VGEVTQRDLLKNALRMRPDRIILGEVRGAEVLDMLQAMNTGHDGSLATLHANSPRDCIAR
LELMINLSGVDIPPVSIRRQIDSAIDLIIFMARMRDGKRRVVSVTEVAGVEEDNVVLQDI
FNFEQKIHPVSKEATNRFKATGLRPRCQYKIEEQGYQMPASWFNFDLDVH
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaatcttaaagatcgctttaatctaaaccgccatgctcaagaggatgtggcgggatct
gtcaagcctaaagttcaagctaaggctgtttcgatgcaaactaaaccggaacctattaga
gcgccgctgattcaaaataataattttttgacgataaaggctcgttgccaaaaacaggct
gcagaagatgaagctttttatcgcgccgatagccaagaaacacgtcaagagctcaggcca
cgacttgaagaattgattcgaaaagaatcacaaagcctaggctatcctctttccgacgtc
gaagtgaagcagttgagcagcgagttgttggatgagatttacggattagggcctattgag
tcattaatggcagatcctagtgtgtctgatattttaattaatgggcataatcaggtttat
gtggagcgtaaggggcgaattgagttaacggatgtttgctttattagcgaagaacacctg
cgaaataaagtggacaggatgctttacgtaaccggtagacgagtggacgagcgttcgccg
ctggtggatgcacgtttgtctgatggctcaagaattaatgtgattattcctcctttagcg
gttgatggcattatggtttcgattcgccggtttccaaaagagtcgctacgggcgaaggat
ctgataaattttggggcgatggttgagccgatgttccagtttttagatgcagccgttaaa
tccggcctgaatattttggtctgtggcggcacaggatcgggtaaaacaacgacacttaac
atgttgtcaggtttaataccagaagatgagcgcattgtgactatcgaggatagtgcagaa
ctgcgtatgcagcaagagcatgttgttcgattagaaactcgccctccgaatgcagaaggg
gtcggtgaagtgacgcaacgtgatctattaaaaaatgcgttacgtatgcggccggatagg
attattctcggtgaggttaggggggcagaggtcttggatatgttgcaggcgatgaatacc
gggcacgatggttctttagctacccttcatgctaacagtccaagagattgtattgcgcgt
ttggagttaatgattaatctatcgggtgtggatatcccgccggtgtctattcgccgtcaa
attgacagtgcgattgatttaattatctttatggcaaggatgcgtgacggcaagcgtcga
gttgtttcggtaaccgaggttgccggagttgaagaggataatgtggtgttgcaagatatt
tttaattttgagcagaaaatacaccctgtgtctaaagaggcgactaatcggttcaaggca
accggtttaaggcccagatgccagtataagattgaggagcaggggtatcagatgcctgca
agttggttcaattttgacttggatgttcattaa

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