Thiomicrospira microaerophila: JX580_08705
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Entry
JX580_08705 CDS
T08259
Symbol
thiI
Name
(GenBank) tRNA 4-thiouridine(8) synthase ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
tmh
Thiomicrospira microaerophila
Pathway
tmh00730
Thiamine metabolism
tmh01100
Metabolic pathways
tmh01240
Biosynthesis of cofactors
tmh04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
tmh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JX580_08705 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
JX580_08705 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmh03016
]
JX580_08705 (thiI)
Enzymes [BR:
tmh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
JX580_08705 (thiI)
Transfer RNA biogenesis [BR:
tmh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JX580_08705 (thiI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
Rhodanese
Diphthami_syn_2
tRNA_Me_trans
Motif
Other DBs
NCBI-ProteinID:
UQB41743
LinkDB
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Position
complement(1787977..1789434)
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AA seq
485 aa
AA seq
DB search
MKYIVKFFPEIMIKGDAIKKKMVRRLHENVLRLLKRLDEAIVTTKYWDKIEVFVPAEQPG
LVNEVEKVLLNTPGIDQVWRVKQFPIHNLDSVVEQVVPYALPLIKAKTFAVRARRAGHHP
FTSLELECEVGRLLCEQGEGLGVDLKKPEVKVEFDIYDNTLNIIEARLPAMGGYPIGSQG
EALSLMSGGFDSTVASYLSIKRGVKTHFIFFNLGGKAHELGVKQVAIHLWNKFESSHRIH
FITVPFEEVVAELFRSVHESYMGVMLKRLMLQAAEQVAEQLGIQTLITGESVAQVSSQTL
KNLAAIDQACTKLVLRPLAFMHKTEIMAIADQIGTRQFAETMPEYCGVISRNPVIDASFH
RTLKEAGRFDDTVLQQAIAKMAISAVDQLVEQIVQSSPIEVVTDLEQTDVLVDIRAEIEQ
QSKPLHGAISVPFYQLAQAAKKWSADRRYLLYCKKGVLSQLHAQYLRDAGYSNVFVFRAN
QGSSE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagtatatagttaagttttttccagagattatgattaagggcgatgccatcaaaaag
aagatggttcgtcgtttgcatgaaaatgttttacgtttattgaagcgtttagatgaagcg
attgtaaccactaagtactgggataagattgaggtatttgtcccagctgaacaaccaggc
ctagtgaatgaggtggagaaggtgttgctgaatacgccgggtatagatcaggtttggcga
gttaagcaatttcccattcataatttagactcggttgttgagcaggtagtgccctatgct
ttgccgttaattaaagctaagacttttgcagttcgtgccagaagagcaggccatcaccct
tttacctctttggagcttgagtgtgaggttgggcgcttgctgtgtgagcagggagagggc
ttgggtgttgatttaaaaaaaccggaagtaaaggtggagttcgatatctacgataatact
ttaaatattatagaagcgcgtttaccggcaatgggtggctacccgattggaagtcagggg
gaagcactttcattaatgtctggagggtttgactcgactgtagcgagttatctgtcgatt
aagcgtggcgttaaaacccattttattttttttaatttgggtggtaaggcgcacgagctt
ggcgttaaacaggttgcaatccatttgtggaataaatttgagtcttcgcataggattcat
tttataaccgttccttttgaggaagtggttgcggagttgtttcgttctgttcatgaaagc
tatatgggcgtgatgctaaagcgcttaatgcttcaagcagccgagcaggtggccgagcaa
ttgggtatccagactttaataactggagaaagtgtggcgcaggtttcaagtcagacgtta
aagaacttggctgcgattgaccaggcttgtactaaattggttttgcgtcctcttgcattt
atgcataaaacagagatcatggcgatcgctgaccaaataggaacacgtcagtttgctgaa
accatgcctgaatattgtggcgtaatttcccgaaatcctgtgattgatgcatcgtttcat
cgaacattaaaagaagcgggtcgctttgatgatactgtgttgcaacaggctatagcgaaa
atggcaatctcagcggtcgatcagttggtggagcaaatagtgcaatcgtcgccgattgag
gtggtaaccgatttggaacaaacggatgtattggtggatattcgtgccgagatcgagcag
cagtcaaagcctttgcacggagcgatatccgtgcccttttatcagttagcccaggcagca
aaaaaatggtcagcagataggcgatatctgttatattgcaaaaagggtgtgttgagtcag
cttcatgctcaatatttacgtgatgcaggctacagtaatgtgtttgtttttcgtgccaat
caaggtagctctgaatga
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