Phaeoacremonium minimum: UCRPA7_7416
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Entry
UCRPA7_7416 CDS
T03102
Name
(RefSeq) putative dna mismatch repair protein msh6 protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
tmn
Phaeoacremonium minimum
Pathway
tmn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tmn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UCRPA7_7416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmn03400
]
UCRPA7_7416
DNA repair and recombination proteins [BR:
tmn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UCRPA7_7416
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
FAD_binding_3
AAA_23
AAA_21
AAA_29
AAA_27
Motif
Other DBs
NCBI-GeneID:
19328174
NCBI-ProteinID:
XP_007918139
UniProt:
R8BCQ6
LinkDB
All DBs
Position
Unknown
AA seq
1636 aa
AA seq
DB search
MAAKNAHFLEAPEIVIYDRDTKDVSVKREGYSLSLNGADKDGGLVALQQLGLLDEALQCA
VLGLDSIGGSFKVWDVDWNDILSIRFRPHRGLPTSGIRIARRDLRNILIAAAEDAAMAIT
WGASCVAAEELQSGRIRLRLSCGGDEPIREDECDLLIAADGARSKIRASFRPDDQLSYAG
AVQIGGSARFPDGIPRPLADNWGLVISGQGVCCFFSPVDKETVVWALSRVEDGPREVPND
QTPEQFQALMREALELGGMFAEPFPTLVRKTDAATALCLPARDKKPFYHHDKELGGVVFI
GDSNHAVSPFAGNGANMALKDGWDLAEQICGGDSLESAVARYDAISYPRAQQTLETSHRR
IAIGHSTGLRYFAEFDNDEEGRVTCVCPIASLLVSGVIGKMGAPARTPSSSMAKRASVPS
TGKQQKSILGFFSKAAASTPNASAAASTPASAKTSTSPQQDDVDSSPCLKETTKSNSMAS
SRRHANLTPLPSSDAAEPLSSQENRDSMAAVKVVSDSLPSPLTPAEVVIKQAAVGTKHAL
VSSPSRKAKKVVNYAESSDDDDEDVFVALKARQPRSRGRAARAALDDDDDEEDEYQMDHD
AAAEDDDDDMADFVVSDESDAPSNSKSKKRKRPAPKAAAAPRKRPTTSPSPSKDDEDETM
EDIPAASSAQQWKYDPENITPAQPRPAAHRPAPKPTSSKTKEKAHTREPEQRYSWLADIA
DINRNKPGHPDYDPSTVYVPPMAWNKFSPFEKQYWEIKQKLWNTVVFFKKGKFYELYEND
ATIGHQLFDLKLTDRVNMRMVGVPESSLDMWVNQFVAKGYKVARVDQMESALGKEMRERD
DSSAKSKKQDKIIRRELACVLTGGTLVDGSMLQDDMATYCAAIKESVIDDKPAFGIAFVD
AATGQFFISEFEDDVDLTKFETFVAQTSPRELLLEKSHLSTKALRILKNNTSPLTIWNYM
KAGSDFWDADTTRRELDCSGYFISEDEAREEVWPQKLQEAREKDFLMSALGALTNYLRNL
KLERNLLSQGNFEWYNPIHRNGTLILDGQSLVNLEIFSNTANGGSDGTLFNLLNRCVTPF
GKRLFRQWVCHPLCNIQKINERLDAVDLLNADRSIREQFSSQMTKMPDLERLISRVHAGA
CRAEDFMRVLEGFEQIEYTMSLLSAFGGGNGLVDRLLSSMPNLQEPLNYWKSAFDRKKAQ
DEKLLIPERGIEEDFDSSADNIDRIKGELQDLLTKQKGLLKCKTLKYTDVGKEIYQVEVP
KAVKVPKDWRQMSATAAVKRYYFRQLDELVRELQEAEETHSQIVREVASRFFKRFDSDYE
TWLQAIKITSQLDCLVSLAKASSALGEPSCRPTFVDEERSVLEFEELRHPCMTNSVADFI
PNDIKLGGDEAKINLLTGANAAGKSTILRMSCIAVIMAQIGCYVPAVSARLTPVDRIMSR
LGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVA
SHIGCIGFFATHYHSLATEFENHPEIRARRMQIHVDDENRKITFLYKLEDGVAEGSFGMH
CAAMCGISNRVIERAEVAAKEWEHTSRLKESLERAKTGCYIPLGILSDVAALLRVDGEEE
IGERGVNVLLKAIEAL
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaagaacgctcatttcctcgaagcgcccgagattgtgatatacgacagagac
accaaggatgtaagcgtcaaacgggaagggtattcgctatcactcaatggcgcagacaaa
gacgggggacttgtcgccttgcagcagctgggtctgctggatgaagccttgcagtgtgcg
gttctcggcctcgacagcattggtgggtcgttcaaggtgtgggatgttgactggaacgat
atcctctccattcgattcaggccacacagagggttaccgacctctggcatccggatcgcc
cgcagagacttgcgcaacatactcattgcagctgcagaagacgccgccatggccatcaca
tggggcgcaagttgcgttgctgccgaagaacttcaaagtggccgaatccgacttcgactg
tcctgtggcggtgacgaacccatacgagaggacgagtgcgacctcttgattgctgcagat
ggtgccaggagcaagattcgggctagtttcaggccggacgaccagctcagttacgcgggg
gcggttcagattggcggcagcgccagattcccagatggcatcccacgaccacttgcggac
aactggggtctcgtcatctcagggcagggtgtctgctgcttcttctcgccggtggacaag
gagacagtggtgtgggcactaagccgagtggaggatgggccgcgagaggtgccaaacgac
cagacgccggagcagttccaggcgttgatgcgggaggctcttgagctggggggcatgttc
gcggagccgttcccgacgctggtgcggaagacggacgcagcgacggcgctgtgcctgccg
gcccgagacaagaagcccttctaccaccacgacaaggagctcggcggtgtggtgtttatt
ggcgacagcaaccacgctgtcagcccgtttgcgggaaacggggccaacatggccttgaag
gacgggtgggacttggccgagcagatctgtggaggcgacagcttggagagtgctgtggca
cgctacgacgcgatcagctaccctcgagcacagcagactctcgagacatcgcaccggagg
atagccataggccacagcacagggcttagatacttcgcggagtttgacaatgatgaggag
gggcgtgtcacttgtgtgtgtccaattgcttctcttctcgtgtccggcgtcataggcaag
atgggagctcctgcgcgtacgccgtcgtcgtcgatggccaaaagagcgagtgtgccgtcc
acaggcaagcagcagaagagcatcctcggtttcttctccaaggcagccgcctcaactccc
aatgcgtccgccgctgcctccacgcctgcatccgccaaaacgtccacctccccccaacaa
gacgacgtcgactcgtccccgtgcctcaaggagaccacaaaatccaactccatggcctcc
tccaggcgccacgccaacctcaccccgctgcccagcagtgacgccgccgagcccctcagc
tctcaagagaacagagactcaatggctgcagtcaaggtagtgtccgacagcttgccctcg
cctttgacccctgctgaggttgtcatcaagcaggcggccgtcggcaccaagcacgccctc
gtcagcagtccttctcgcaaggcgaagaaagtcgttaactacgccgagtcttccgatgac
gatgatgaggacgtcttcgtcgccctcaaggcccgccaacctagaagccgtggccgagcc
gctcgagccgcactggacgacgatgacgacgaggaagatgagtaccagatggatcacgac
gcagctgcagaagatgacgacgatgatatggctgacttcgtcgtctctgatgagtccgac
gctccctccaactccaagtctaagaaaaggaagcgtcctgctcccaaagccgcggccgcc
cctcggaaacgtccaacaacctcgccatctccttccaaggacgatgaagacgagaccatg
gaggacattccggccgcgtcctcagcccagcaatggaaatatgatcctgaaaacatcaca
ccagcacagccacggcctgccgcgcatcggcctgccccgaagcccacatcttcaaagacc
aaggagaaggctcacaccagggagcccgagcagagatattcttggctagctgacatagcc
gatatcaaccgcaacaagccaggccacccagactacgatccatctactgtctatgttccg
ccaatggcatggaataagttctcgccgtttgaaaagcaatactgggagatcaaacagaaa
ttatggaacacggtggttttcttcaagaaaggcaaattctacgagctctacgagaatgac
gctaccatcggccaccaactgttcgacctgaaactaaccgatcgggtcaatatgcgcatg
gttggcgttcccgaaagctcccttgacatgtgggtcaaccagttcgtcgcaaagggctac
aaggtagcccgcgtggaccagatggaatcggctctcggcaaagagatgcgagagcgggac
gattcgagcgccaagagcaagaagcaggacaagatcatccgacgagagcttgcctgtgtt
ctcactggcggcactttggtcgacggcagcatgctgcaagacgacatggccacatactgc
gccgcgatcaaagaatcagtcattgatgacaagcccgcctttggaatcgcctttgtcgat
gctgctacgggtcagttctttatctcagagttcgaggacgatgtcgacctcactaagttc
gagacatttgtcgcacagacctcgccacgagaactgctcctagagaagtcgcacctctcg
acaaaggctctgcgtatcctcaagaataacacaagccccctgactatctggaactacatg
aaagctggcagcgacttctgggatgccgatactactcggcgtgagctcgattgcagtggc
tatttcatctctgaggacgaagcccgagaagaggtctggccacagaagcttcaagaggcc
agggaaaaggatttcctcatgtctgccctcggagcgttgaccaactatctaaggaacctt
aaattggagcgcaatctgctctctcagggcaacttcgaatggtacaaccctattcatcgc
aacggaacgctgattcttgacggccagtccctcgtcaatctggaaatattctccaacacc
gccaacggcggatcggatggcacccttttcaatttgctcaaccgatgcgtcaccccattc
gggaagcgtctattcaggcaatgggtgtgccatccgttatgcaacatacagaagatcaac
gagcgccttgatgccgtcgatctattgaacgctgatagaagcattcgtgagcaattttca
tctcagatgaccaagatgcctgacctcgagaggctcatctcccgagttcacgctggtgcc
tgccgagctgaagacttcatgagagttctcgaagggttcgagcagattgagtacactatg
agccttttgagtgcctttggtggtggaaatggcctcgttgacagacttctgtcatcgatg
cctaacttgcaggagcctttgaattattggaagagtgcctttgacaggaagaaggcccag
gacgagaaacttctgatccctgagcggggaattgaggaggacttcgacagcagtgcagac
aacatcgatcggatcaaaggcgaattacaggatcttctaactaaacagaaaggtctgctg
aagtgtaagacgctgaaatacaccgatgttggcaaggaaatctaccaagtagaggttcct
aaagctgtcaaagttcccaaagactggcgtcaaatgtcagctaccgccgctgtaaagcgc
tactatttccgccaacttgatgaacttgttcgggaattgcaggaagccgaggagacccat
tcccagattgtgcgtgaggttgcctctcgatttttcaaacgtttcgattcggactatgag
acttggctgcaggcaattaagatcacctcgcagcttgactgtctcgtcagtcttgctaag
gcttcgtccgcattgggcgagcctagctgccggccaacatttgtagacgaagaacgcagc
gtcctggaattcgaggagcttcgtcacccttgtatgaccaactccgttgctgatttcatt
ccgaacgatatcaaacttggtggagacgaggcaaagatcaacctgctgacgggtgcgaac
gcggccggaaagtccactatccttcgaatgtcgtgcattgcagttatcatggctcagatt
ggctgttatgtcccggctgtttctgcccgcttgacgcctgttgaccgtatcatgtctcga
cttggcgctaatgacaacatcttcgcggcgcaatccacgttcttcgtagagctatctgag
acgaagaagattctctccgaggctacaccaagatcactcgtcattcttgatgagctcggt
cgaggcacgtcatcttacgatggtgtcgcagtggcccaggccgtactccaccatgtagcg
tctcacattggctgcataggctttttcgctacacattatcactctctcgctacggagttc
gaaaaccatcctgagatccgagctaggcgcatgcagatccacgtggatgacgagaaccgc
aagataaccttcttgtacaagctggaggatggtgtggccgagggctccttcggcatgcac
tgcgctgccatgtgtggcatttcaaacagagtcatcgagagagcagaggttgcggccaaa
gagtgggaacacacgagcaggctgaaagaaagcctggaacgcgccaagacaggctgctat
attccactcggtattctaagcgacgtcgcagccctactgagagtcgatggtgaggaagaa
attggtgaacgtggagttaacgtgctgttgaaggccatcgaggctctgtaa
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integrated database retrieval system
