Tremella mesenterica: TREMEDRAFT_28999
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Entry
TREMEDRAFT_28999 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01886
glutaminyl-tRNA synthetase [EC:
6.1.1.18
]
Organism
tms
Tremella mesenterica
Pathway
tms00970
Aminoacyl-tRNA biosynthesis
tms01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
TREMEDRAFT_28999
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tms01007
]
TREMEDRAFT_28999
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tms03016
]
TREMEDRAFT_28999
Enzymes [BR:
tms01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.18 glutamine---tRNA ligase
TREMEDRAFT_28999
Amino acid related enzymes [BR:
tms01007
]
Aminoacyl-tRNA synthetase
Class I (A)
TREMEDRAFT_28999
Transfer RNA biogenesis [BR:
tms03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
TREMEDRAFT_28999
Prokaryotic type
Other AARSs
TREMEDRAFT_28999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1c
tRNA_synt_1c_R1
tRNA-synt_1c_C
tRNA-synt_1c_C2
tRNA_synt_1c_R2
Motif
Other DBs
NCBI-GeneID:
18491935
NCBI-ProteinID:
XP_007003244
JGI:
Treme1_28999
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MPPKFDPTAPEVQALLSLFTNLGLNQNSATELVRQPKAGQALKGLIEEFHLQGQTFDERQ
AAALVKLSAVGGKLGPAEKGYVLQRITGGELRSPDQVTAAVKFLEGNPEGTPVNEEEFDK
ACGVGVDINVEHLPTLLKDYISTLSTPPKDWTGIGPLLGGIKNSTSDLRWANVADVKSSL
EIVFTELFGSREEANKARAEAQAAASRPKKEVKTAIPIPSAEASSSTIPAIPTNIFREGF
LSEFHKVGGNPQIDPRLKEEHLEWTKGMVYTRFPPEPNGFLHIGHVKAIMVDFGYAKYHG
GRCYLRYDDTNPEAEEGRFFQSILESVRWLGFEPWKITYSSDNFDRLYELAIELIRRGKA
YVCTCDAEKIKEDRGGGHGNPVACEHRERPIAESLVEFERMKNGEYPEKGACLRMKMDLS
SGNPYMWDSVAYRVKYAPHHRTGDKWKIYPTYDFTHCLCDSFENITHSLCTVEFIPARES
YEWLCDALTVYKPRQYEFARLNLQGTFLSKRKIARLVTCGLVQGWDDPRLYTLIALRRRG
IPPGALLSFVSELGVTNIPSTTEIKKFEYVIRSYLEDSAPRLMMILNPIKLIIENVPSDY
DVPVQVPLHPKIPSMGSVETRFTKEVYIEAEDFRVEDSPDYFRLAPGKAVGLFKAPYPVI
CTSYSTNDIGQVTEIRCNLQSEGKIQKPKAFIQWVNAKDAVKIDEVRYFLPLFKSDPPPA
DFEGDVNPDSIKIYKEAIIEPAFYQLAKKAMSDAKKESEERTLKALKDSAVSEIQAGDGE
EGPKFTAESLVGMENVRFQGMRIAYFALDKDSKVGCLEGDEKEGKEGDKIILNRIVSLKE
DAGKSS
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaagttcgatcccacagctccagaggtacaagctctcctatcgctcttcacc
aacctcggtctcaaccaaaactccgccaccgagctggtccgtcagcctaaagctggtcaa
gctctgaaaggtctcatcgaggagtttcatctccagggccagacgttcgatgagaggcaa
gcggcagcactggtcaagctcagtgcggtaggaggtaagctgggcccggcagagaaaggg
tacgtccttcagagaataacaggtggtgaacttcgatcaccagatcaagttactgctgcg
gtcaagtttttagaaggcaacccggaaggtacaccagtcaatgaagaagaatttgacaaa
gcgtgtggcgtgggggtcgacataaatgttgaacatctacctactttgttgaaagattac
atttcaactctctccacaccaccgaaagattggacgggtataggaccactccttggagga
atcaaaaactcgacttcagatctgagatgggcaaacgtagcagacgtcaaatcatctctc
gagatcgtattcacagagctgtttggatccagagaggaggccaacaaagcccgagctgag
gcacaagctgcagcttcaaggccgaagaaagaggtcaaaaccgcgattcccataccttcc
gcagaggcctccagctctactatcccagctatccccaccaacatcttcagagaaggattc
ctgagtgaatttcacaaagtcggagggaatcctcaaatcgatccaaggctgaaagaggag
catctggaatggacgaaaggtatggtgtacactcgcttcccacctgaaccaaatggattt
ctgcatataggtcacgtaaaagctatcatggtggatttcggatatgcaaagtatcacggt
ggtcgatgttatcttcgatatgacgacacaaatcctgaagcggaagaaggtagatttttc
cagtccatcctagagtcggtcagatggctgggttttgaaccttggaagatcacatattct
tcggataattttgatcggttgtatgaactcgcgattgagctcataaggagagggaaggca
tatgtttgtacttgcgatgccgagaagatcaaagaggatagaggagggggacacggtaat
cccgtggcatgtgaacatcgcgaacgtcccattgccgaatccttggtagaattcgaacgg
atgaagaatggcgagtatccagagaagggggcttgtctgcggatgaaaatggatttgagc
agtggtaacccgtatatgtgggattcggtcgcttacagggtgaagtatgctccgcatcac
aggaccggggataagtggaaaatttatcccacgtacgatttcactcattgtctctgcgat
tcgttcgagaatatcacccactccctatgcacagtcgagttcattcccgcccgtgaatcc
tacgaatggctctgcgatgctctaacagtttacaaacccaggcaatacgaattcgctcgt
ctcaatcttcaaggtactttcttatccaaacgcaaaatcgcccgcctcgtcacatgcggt
ctcgtacaaggatgggatgatcctcgtctttacacactcatagctcttcgtcgtcgtgga
atacctccaggagctttattatcctttgtatccgaactaggagtcaccaacattccctct
actaccgagatcaaaaagtttgaatatgtcattcgatcataccttgaagattcagctcca
agattaatgatgatcctcaaccctataaaattaatcattgaaaatgttccatccgattac
gacgttcccgttcaagttcctcttcatcctaaaatcccatcgatgggtagtgttgaaact
aggttcacaaaagaagtttatatcgaagctgaagatttccgtgttgaagattcacctgat
tatttcagactagctcctggaaaagccgtaggattattcaaagctccttatcctgtgata
tgtacttcgtactcgacaaatgatatcggtcaagtgacggagataagatgtaatcttcaa
tcagaaggaaaaatccaaaaaccaaaagctttcattcaatgggtcaacgcaaaagatgct
gtgaagattgacgaagttcgttatttccttcctttattcaaatctgatcctcctccagcg
gatttcgaaggtgatgttaatccggattcaatcaagatttacaaagaagcaattatagaa
cctgctttctatcaattggcaaagaaagcaatgtcggatgcgaagaaagaaagtgaagaa
aggactttgaaagctttgaaagattcggctgtatctgagattcaagcaggagatggggag
gaaggtccgaagttcacagcggagagtttggtaggtatggagaatgtgagatttcaaggt
atgcggattgcgtatttcgctttggataaagatagcaaggttggatgtttggaaggggat
gaaaaggaagggaaggaaggagataaaattatcttgaataggatagtgagtttgaaagag
gatgctgggaaaagttcctag
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