Tremella mesenterica: TREMEDRAFT_29353
Help
Entry
TREMEDRAFT_29353 CDS
T03139
Name
(RefSeq) hypothetical protein
KO
K01702
3-isopropylmalate dehydratase [EC:
4.2.1.33
]
Organism
tms
Tremella mesenterica
Pathway
tms00290
Valine, leucine and isoleucine biosynthesis
tms01100
Metabolic pathways
tms01110
Biosynthesis of secondary metabolites
tms01210
2-Oxocarboxylic acid metabolism
tms01230
Biosynthesis of amino acids
Module
tms_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
tms00001
]
09100 Metabolism
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
TREMEDRAFT_29353
Enzymes [BR:
tms01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
TREMEDRAFT_29353
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-GeneID:
18491986
NCBI-ProteinID:
XP_007003295
JGI:
Treme1_29353
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MPAPTVQPRTLYDKVFDDHVVYSGEGDTLLYIDRHLVHEVTSPQAFEGLRNAGRKVRRTD
CTLATVDHNIPTITRKNFKSISTFISEPDSRAQCAALEEHVKEFGLTYFGMDDKRQEGIV
HIIGPEQGFTLPGTTVVCGDSHTSTHGAFGALAFGIGTSEVEHVLATQCLPQAKSKNMRI
SVDGPLAEGVNSKDIVLHIIGVIGTAGGTGCVIEFSGSTIRALSMEARMSICNMAIEGGA
RAGMIAPDDITFEYLKGRPLSPREGEEWDMAEAYWRTLKTDPGAKYDIEVEIRSEDIIPT
VTWGTSPQDVVPIAGVVPNPEDMASNKRGNAIRSLEYMGLTPGTPMEQVKIDKAFLGSCT
NGRIEDLRSAAKVIIASEKNGGPTHVSEHVYAMVVPGSGLVKQQAEGEGLDVIFKKAGFD
WREAGCSMCLGMNPDQLKPQERCASTSNRNFEGRQGAGGRTHLMSPAMVAAAALTGYLTD
VRKLMGSHISEDGGLKITSYFDYLSPLAVAAPDAQPTEISENEQTPVKVANAASAGLPKF
NIVKGICAPMWEANIDTDKIIPKQFLKTLLRTGLGSALFWPLRYDVKTGDIIPEFVLNKE
PFNKSSLLVCTGANFGCGSSREHAPWALNDFGIRCVMAPSFGDIFKNNCFKNGMLPLELS
QEALDVLYKDAESGKDITVDLEKQVVVRPNGEEIQFSIDPFRRHCLLNGLDDIGLTLEHR
DAIEAFEEKRSNTWPWLDGIGYAKKGGKVVPLPQRKGVKKMEW
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcaccgacagtccaaccccgaaccctatacgacaaagtattcgacgaccatgtc
gtttactctggtgaaggtgacaccctcttgtatatcgaccgtcatcttgtgcatgaagtc
acctctcctcaagctttcgaaggattgagaaatgctggacgtaaagttcgtaggaccgat
tgtactctggcaactgtcgaccataacattccaaccatcactagaaaaaacttcaaatct
atttcgactttcatctctgaacctgatagtagggcgcagtgcgctgccctggaagagcat
gtgaaagaatttggtttgacttattttggtatggatgataaacgacaagaaggaatcgtt
catatcattggacctgaacaggggtttactcttccaggaaccactgtcgtttgtggtgat
tctcatacatccacccacggcgcattcggcgctctggctttcggtatcggtacttctgaa
gtcgaacatgtccttgctactcaatgtcttcctcaagccaaatcaaagaacatgcgaatc
tccgtcgatggtcccttagccgaaggtgtcaactctaaagatatcgtccttcatatcatc
ggtgtcatcggtacagccggtggaacaggatgtgttatcgaattttccggttctactatc
cgtgcactcagtatggaagctcgtatgtccatttgtaacatggccattgaaggcggtgct
cgagcaggaatgatagctcctgatgatataacctttgaatatctcaaaggacgacctctg
agtcctcgagaaggagaagaatgggatatggcagaggcgtattggagaactttaaaaacg
gatccaggcgcgaaatacgatatagaggttgaaattcgatctgaagatattattcctacc
gttacttggggtacaagtcctcaagatgtcgttcctatcgctggtgtcgtaccgaatcca
gaagatatggcatctaacaaacgtggtaacgctattcgttctctcgaatatatgggttta
actcctggtactccaatggaacaagttaagattgataaagctttccttggatcctgtaca
aatggtcgaattgaagatcttcgttccgcagcaaaagtcattatagcttctgaaaaaaac
ggtggtccaacacatgtctctgaacacgtttacgcaatggtcgttcctggttctggattg
gtcaaacaacaagctgaaggagaaggattagatgttatcttcaaaaaagcaggatttgat
tggagagaagctggatgttcaatgtgtttaggaatgaaccctgatcaattaaaacctcaa
gaacgttgtgcttcaacttcaaatcgtaatttcgaaggacgccaaggagcaggaggtaga
actcatttaatgtcacctgccatggtagctgcggcagctttgactggatatcttacagat
gtcagaaaacttatgggaagtcatatttcagaagatggtggattaaaaattacttcatat
ttcgattatctttcacctctcgctgtagcagcaccagatgctcaacctaccgaaatatca
gaaaatgaacaaactccagtcaaagtcgccaatgcagcttcggcaggtttacccaaattc
aatatcgtaaaaggaatatgtgcaccaatgtgggaagccaatatcgatacggataaaatc
atacctaaacaatttttgaaaactttacttcgtactggacttggatcagctttattctgg
ccacttcgatatgatgttaaaactggtgatataataccggaattcgtattgaataaagaa
ccattcaataaatcttctttattagtttgtacaggtgctaatttcggttgtggttcttct
cgtgaacatgctccttgggctttaaacgatttcggtataagatgcgtcatggcaccttct
ttcggagatattttcaagaataattgtttcaaaaacggtatgttaccactggaactctct
caagaagctttggatgttttgtataaggatgctgaatctggaaaagatatcacggtggat
ctggagaaacaagttgtcgtaagacctaatggagaggaaatccaatttagtatagatcca
tttaggagacattgtttacttaatggtttggatgatattggtctcacgttggaacatagg
gatgcgattgaagcttttgaagaaaagagatcaaacacttggccttggttggatgggata
ggatatgctaagaaaggaggaaaggtcgttcctcttcctcagaggaaaggggtgaagaag
atggagtggtag
DBGET
integrated database retrieval system
