Trichechus manatus latirostris (Florida manatee): 101341095
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Entry
101341095 CDS
T05135
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03020
RNA polymerase
tmu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101341095
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
101341095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101341095
Enzymes [BR:
tmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
101341095
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
101341095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
101341095
NCBI-ProteinID:
XP_004383224
UniProt:
A0A2Y9DZ89
LinkDB
All DBs
Position
Unknown
AA seq
1390 aa
AA seq
DB search
MVKEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNNHAPLLYGVLDHRM
GTSEKDRPCETCGKNLADCLGHYGYVDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQE
EKKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKTICHHCGAFNGTVKKCGLLKIIHEKYK
TNKKMVDPVVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLM
NPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANF
IQQRHTHMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQI
FSVILRPSDDNPVRANLRTKGKQYCGKGEDLCVNDSYVTIQNSELMSGSMDKGTLGSGSK
NNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLTAKYELLNAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCQNEPALSKNELTLTMESIMQKDEFLC
CQDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQIEKFLETCRD
KYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAI
STPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLL
RLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVV
VQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGI
EAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLAS
FEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPNPPKRPLIFD
TNEFHISLVT
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggagcagttccgggagacggatgtggccaagaaaataagccacatctgtttt
ggcatgaagtcccctgaggagatgcgccagcaggcgcacatccaggttgtgagtaagaac
ttgtacagccaggacaacaaccatgcccccttgctgtatggggtgctggaccacaggatg
ggtacaagtgagaaggatcgtccttgtgaaacctgtggaaagaacttggccgactgtctg
ggccactatggatatgttgacttggaattgccttgttttcacgtggggtacttcagagca
gttataggcatcttacagatgatctgcaaaacctgctgccacatcatgctgtcccaggag
gagaagaagcagtttctggattatctgaagaggccaggcctgacctaccttcagaagcga
ggcctaaagaagaagatctctgataagtgccggaaaaaaaccatttgccatcactgtggt
gcttttaacggtactgtaaagaaatgtggattactgaagataattcacgagaaatacaag
accaacaaaaaaatggtggatccagttgtgtcaaatttccttcagtcttttgaaacagcc
attgaacataacaaagaagtagaaccactgctgggaagggcccaggaaaacttgaatccc
ttagtagttctgaatttatttaaacgaatccctgctgaagatgttcctctacttctaatg
aacccggaagctggaaaaccctccgatttgattctcacgcgacttttggtgccccctttg
tgtatcagaccctctgttgtgagcgatttgaagtctggcaccaatgaagatgatctgaca
atgaaattgacagaaatcattttcctaaatgatgtcattaaaaagcatcgaatatctggc
gccaagacgcagatgatcatggaggactgggacttcctgcagctgcagtgtgccctttac
attaacagcgagctctcaggcattcccctcaacatggcaccgaagaagtggaccagaggt
tttgtccagcgcctgaaaggaaaacaaggacgatttagaggcaatctttcaggaaagaga
gtggatttttctggcagaacagtcatctcacctgaccccaacctccggattgatgaggta
gcagtaccagttcatgtggccaaaattctaacttttcctgaaaaggtgaacaaagcaaac
atcaattttttgaggaaactggttcaaaatggccctgaagttcacccaggagccaatttc
attcagcagagacatacgcatatgaaaaggtttttgaaatacggaaatcgggaaaagatg
gctcaggagctcaagtacggtgacattgtcgagagacacctcatagatggggatgtggtg
ctgttcaaccggcagccctcgctgcacaaactgagcattatggctcatctggccagggtc
aagccccaccggaccttcagattcaacgaatgtgtctgtacaccatacaatgcagacttt
gatggcgatgaaatgaatcttcatcttcctcaaacagaagaagctaaagcagaggccctt
gttttgatggggactaaagcaaatcttgtaaccccaagaaatggggagccactgattgct
gctattcaggattttctaacaggtgcctatctgctcacccttaaagacactttctttgac
cgagccaaggcttgccaaatcattgcttcaatcttggttggcaaggatgagaaaattaaa
gttcgccttccaccccctacaatattaaagcctgtcaccctgtggaccggaaagcagatc
ttcagtgtcatcctcagacctagtgatgacaatccagtgagggccaacctccgaaccaag
ggcaagcagtactgtggcaaaggggaggacctgtgtgtcaatgattcctatgttactatc
cagaacagtgagttgatgagtggcagcatggacaaaggaacattgggatcaggatccaag
aacaatattttttacattttgctgcgagactgggggcagaatgaagctgccgatgcaatg
tcccggcttgccaggctggctcctgtctacctctctaaccggggattctccattgggatt
ggtgacgtcacacctggtcaaggactgctaacggccaaatatgagctgctgaatgctggc
tacaaaaagtgtgacgagtacatcgaggccttaaacacgggcaagctgcagcagcagccc
ggctgcactgctgaggagactctggaggcattgatccttaaggagctgtctgtgatccgg
gaccatgcgggcagcgcctgcctccgagagctcgacaagagcaacagccccctcatcatg
gcactttgtggctcgaaaggttccttcatcaacatatcacagatgattgcctgtgtggga
cagcaggccatcagcggctctcgagtgccagatggctttgaaaacaggtccttgcctcac
tttgaaaaacactccaagctcccagctgccaaaggctttgtggctaatagcttttattct
ggtttgacaccaactgagtttttcttccacacaatggccggccgggaaggcctggtggac
acggccgtaaagacagctgaaacaggatacatgcagagacggcttgtaaaatccctcgaa
gatctctgctcacagtacgatttgacagtccgcagttctaccggagatattatccagttc
atttatggaggagatggcttagaccctgcagctatggagggaaaagatgagcccttagag
tttaaaagggttctggacaacatcaaagcagtcttcccgtgtcagaatgagcctgctctc
agtaagaacgagctgaccttgaccatggagtccatcatgcagaaggacgagttcctctgc
tgccaggacagctttctccaggaaataaaaaaattcataaagggggtttctgagaagatc
aagaaaaccagagataaatatggcatcaatgataacggcacaacagagccccgcgtgttg
taccagttggaccggatcacccctacccagatagaaaagtttctggagacctgtagggac
aagtacatgagggcccagatggagccgggctctgcagtgggcgccctctgtgcccagagc
attggcgagccaggcacccagatgaccctgaagactttccacttcgctggcgtggcctcc
atgaacatcaccttgggcgtgccccgcatcaaagagatcatcaacgcctccaaggccatc
agcactccaattatcacagctcagctggacaaagatgatgatgccgattatgctcgcctc
gtgaaagggagaattgagaaaaccctcttgggagagatctcagagtatatcgaagaagtg
tttcttcccgatgattgctttattctcgtcaagctctccttggaacggattagacttctg
agactggaagtgaacgctgagacggtgcggtactccatctgcacgtccaagctccgtgtg
aagccaggcgatgtggctgtgcacggcgaggctgtggtgtgtgtcacccccagagagaac
agcaagagctccatgtactacgtgctgcagttcctgaaggaggacctccccaaggtggtg
gtgcagggcatcccagaggtgtcccgagctgtcatccacatcgacgagcagagcgggaag
gagaagtataagcttctggtggaaggcgataatctgcgggctgtcatggccacacatggg
gtgaagggcacccggaccacctccaataacacctatgaggtggagaaaaccctgggcatc
gaagccgcccggacaacgatcatcaatgagatccagtacacgatggtcaaccacggcatg
agcatcgacaggaggcacgtgatgctgctctcggacctgatgacgtacaagggtgaagtc
ctgggcatcacaaggtttggcctggcaaagatgaaggagagcgtgctgatgctggcgtcc
ttcgagaagacagcggaccacctctttgacgctgcctattttgggcagaaggactccgtg
tgtggagtgtctgaatgcatcatcatgggaatcccaatgaacattggaaccgggctcttc
aagctgctccacaaggctgacagggacccaaaccctcccaagaggcccctgatcttcgac
acaaacgaattccacatctcccttgtcacatag
DBGET
integrated database retrieval system
