Trichechus manatus latirostris (Florida manatee): 101345146
Help
Entry
101345146 CDS
T05135
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04064
NF-kappa B signaling pathway
tmu04514
Cell adhesion molecules
tmu04668
TNF signaling pathway
tmu04670
Leukocyte transendothelial migration
tmu04933
AGE-RAGE signaling pathway in diabetic complications
tmu05143
African trypanosomiasis
tmu05144
Malaria
tmu05417
Lipid and atherosclerosis
tmu05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
101345146
04668 TNF signaling pathway
101345146
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101345146
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
101345146
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
101345146
05143 African trypanosomiasis
101345146
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
101345146
05418 Fluid shear stress and atherosclerosis
101345146
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101345146
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
tmu04090
]
101345146
04091 Lectins [BR:
tmu04091
]
101345146
CD molecules [BR:
tmu04090
]
Proteins
101345146
Lectins [BR:
tmu04091
]
I-type lectins (Siglecs)
101345146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
ICAM_N
Ig_4
ICAM1_3_5_D2
Ig_5
Ig_6
C1-set
tRNA_anti-like
Motif
Other DBs
NCBI-GeneID:
101345146
NCBI-ProteinID:
XP_004385780
UniProt:
A0A2Y9E282
LinkDB
All DBs
Position
Unknown
AA seq
739 aa
AA seq
DB search
MPRKMVVIFGTSNILWMVFAASQAFKIEISPESKVLAPIGESVSLTCSTTGCDSPSFSWR
TQIDSPLNAKVRSEGTKSTLTMDPVSFDNDHSYLCTATCGSGKLEKGIQVEPYSFPKDPE
IQLSGSLEVGKPVTVICLVPDVYPFDRLEIDLLKDDQVMKSQIFLEDMDKKSTETKSLEV
TFIPVIKDIGKTLFCRAELHIAGIDPELAERKTTKVLQVYISPKNIVILVNPSTSLQEGG
SVTMMCSSDGLPAPEIFWSKKLDNGNLQPLSGNATLTLIAMRVEDSGIYICEGVNLIGRN
RKEVELIVQEKLFTVEVSPKSRIAAQIGDSVVLTCNVTGCGSPSFSWRTQIDSPLSGKVR
SEGTKSTLTLSPISFENEHDYLCTVTCGHKKLEKGIQVQVYSFLRDPEIEMSDLVVNENP
VTVSCKVPEVYPFDRLEIDLLMGENIIKNKGFWGDMDKQSLETKSLEMTFIPTTKDTGKV
LVCRAKLNISEMEFEPKQRQSTETLYVNVAPRDTTILVSPSSIVEEGSFVNLTCFSDGLP
APKILWSKKLNNGDLQPLSENTTFTLMSTKMKDSGIYVCEGINQAGINRKEVELIIQVVP
KDIQLTAFPSESVKEGDTVTISCTCGNVSEIWITLKKKAETGDKMLKSIDGTYTIPKAQL
EDAGVYECESKSAVGSQLRSLTLDVKGRENNQDYLSPGLLVLYCACSLIIPVIGMTVYFV
RKANMKGSYSLVEALKSKV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggaagatggttgtaatctttggaacttcaaacatactttggatggtgtttgca
gcttctcaagcttttaaaatcgagatctcccctgaatccaaagttcttgctccgattggt
gagtcggtctcactgacctgcagcaccacaggctgcgactccccatcgttctcttggaga
acccagatagacagtccgctgaatgcgaaggtgaggagtgagggcaccaagtccacgctg
accatggatcctgttagtttcgacaatgaccattcttacctgtgcacagcgacttgtgga
tctgggaaactggaaaaaggaatccaggtggaaccctactctttccctaaagacccagag
atccagttgagtggctcattggaggttggaaagccagtcacagtcatttgtttggtccct
gatgtttacccatttgacaggctggagatagatttactgaaggacgaccaagtcatgaag
agtcagatttttctggaggacatggacaagaagtccacggaaaccaagagtttagaagta
acctttattcctgtcatcaaggatattggaaaaacccttttttgccgagctgaattacac
attgctggaattgatcctgaactcgcagaaagaaagaccacaaaagtactgcaagtctac
atctcacccaagaatatagttatccttgtgaacccttccacaagtctgcaagaaggtggc
tctgtgaccatgatgtgttccagtgatggcctgccagctccagagattttctggagcaag
aaattagataatgggaatctacagcccctttctgggaatgcaactctcactttaattgcc
atgagggtggaagattctggaatttatatatgtgaaggagttaatctgattgggagaaac
agaaaagaagtggaattaattgttcaagagaaactgtttacagtcgaggtctcccctaag
tcccggattgctgctcagattggggactcagttgtgttgacgtgtaatgtcacaggctgt
ggatccccatctttctcttggagaacccagatagacagcccactcagtgggaaggtgaga
agcgaggggaccaagtccacgctgaccctgagtcccattagctttgagaacgaacacgat
tacctgtgtacagtgacttgtgggcataagaaactggaaaaaggaatccaggtgcaagtc
tattcgttccttagagatccagaaattgagatgagtgatcttgtagtgaatgaaaacccc
gtcaccgtaagctgcaaggttcctgaagtgtacccttttgaccggttggagattgattta
ctaatgggagaaaatattataaagaataaaggcttttggggggacatggataagcaatcc
ctagagaccaagagtttggaaatgacgttcatccccaccaccaaagacactggaaaagtt
cttgtttgtcgggctaagttaaatattagtgaaatggagtttgaacccaaacaaaggcag
agtacagagacactgtatgttaacgttgccccgagggatacaaccatcctggttagccct
tcctccattgtggaggaaggtagttttgtaaacttgacgtgctttagtgatggccttcca
gctccaaagattctgtggagcaagaagctaaataacggagatctacagcctctttccgaa
aatacaactttcaccttaatgtctacaaagatgaaagattctggtatttatgtgtgtgaa
gggattaaccaggctggaataaacagaaaagaagtcgaattaattattcaagttgtgcca
aaagatatacagcttacagcttttccatctgagagtgtcaaggaaggagacactgtcact
atttcctgtacatgtggaaacgtttcagaaatttggataacgctgaagaagaaagcagaa
acgggagacaagatgctaaaatctatagatggcacatataccatacccaaagcccagtta
gaggatgcaggagtgtacgaatgtgaatctaaaagtgcggttggctcccagttaagaagc
ttgacacttgatgttaaaggaagagaaaataaccaggactatttgtctcctggacttctt
gtgctctattgtgcatgctccttaataatacctgtcattggaatgaccgtctactttgtg
agaaaagccaacatgaaaggctcatacagtcttgtagaagcactgaaatcaaaagtgtag
DBGET
integrated database retrieval system
