Trichechus manatus latirostris (Florida manatee): 101346050
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Entry
101346050 CDS
T05135
Name
(RefSeq) sodium-dependent serotonin transporter isoform X1
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04721
Synaptic vesicle cycle
tmu04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
101346050
04721 Synaptic vesicle cycle
101346050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tmu02000
]
101346050
Transporters [BR:
tmu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
101346050
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
101346050
NCBI-ProteinID:
XP_004376236
UniProt:
A0A2Y9DKC1
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Position
Unknown
AA seq
630 aa
AA seq
DB search
METKPLNSQKEPSACKDGEDCQENGVLRKGVPAPGDKVETDQISNEYSAVASPGTGDDTQ
HSTPAATTALVAEVHQVERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYLELALGQYHRNGCISIWRKICPIFKGIGYTICIIAFYIASYYNTII
AWALYYLISSFTNQLPWTSCKNSWNTGNCTNYFSQDNITWTLHSTSPAEEFYIRHVLQIH
QSKGLQDLGGINWQLTLCIMLIFTVIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFISGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDECPHIWAKRREWFVLGVVITCFFGSLVT
LTFGGAYMVKLLEEYATGPAVVTVVLIEAIAVSWFYGVNQFCSDVKEMLGFSPGWFWRIC
WMAISPLFLLFIICSFLMSPPQLRLFQHNYPRWSVILGYCIGTSSFICIPTYIAYRLITT
PGTFKERIIKSITPETPTEIPCGDIRLNVV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaagcccttaaattctcagaaggagccgtcagcctgtaaggatggagaagat
tgtcaggaaaatggagttctacggaaaggtgtccctgccccaggtgataaagtggagact
gaccaaatctccaatgagtactcagcggttgccagccctggtacgggagacgacacccag
cactccaccccagcagccaccaccgccctagtggctgaggttcatcaagtggaacgggag
acctggggcaagaaggtggatttcctcctctcggtcattggctatgccgtggacctgggc
aatgtgtggcgctttccctacatttgttaccagaatggaggaggggccttcctcctcccc
tacaccatcatggccatttttggagggatcccactcttctacctggagctagcgctgggc
cagtaccacagaaacggatgcatttcaatatggcggaaaatctgcccgattttcaaagga
atcggttacaccatctgcatcattgccttctacattgcctcctactacaacactattatt
gcctgggcgctctactacctcatctcctccttcaccaaccagctgccctggacaagctgc
aagaactcctggaacactggcaactgcaccaactacttctcccaggacaacatcacctgg
actctccactccacctctccagctgaagagttttacatacgccatgtcctgcagatccac
cagtctaagggactccaggacctgggtggcatcaactggcagcttaccctctgcatcatg
ctgatctttactgttatctactttagtatctggaaaggcgtcaaaacatctggcaaggtg
gtgtgggtgacagctaccttcccttatatcatcctctctgtcctgctggtgaggggagcc
accctccctggagcctggagaggtgtcctcttttacctgaaacccaactggcagaaactt
ctggagacaggggtgtgggtggatgctgcagctcagatcttcttctctcttggtcctggc
tttggggtcctactggcttttgctagctacaacaaattcaacaacaactgttaccaagat
gccctggtgaccagcgtggtgaactgcatgacgagcttcatttcgggatttgtcatcttc
acggtactcgggtatatggctgaaatgaggaacgaagacgtgtctgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
acattctttgccatcatcttcttcttgatgttaatcacgctgggcttggacagcacgttt
gcaggcttggagggggtgatcacggctgtgctggatgagtgtccccacatctgggccaag
cgtcgggagtggttcgtgctcggagtggtcatcacctgcttctttggatccctggtcacc
ctgacttttggaggggcctacatggtgaagctgctagaggaatacgccacggggcctgcg
gtcgtcactgtcgtgcttatcgaagcaattgctgtgtcttggttctatggcgtcaatcag
ttctgcagtgacgtgaaggaaatgctgggcttcagccctggatggttttggaggatctgc
tggatggccatcagccctctgtttctcctgttcatcatttgcagttttttgatgagcccc
ccacagctacggctcttccaacataattacccccgctggagtgtcatcttgggctactgc
ataggaacctcgtctttcatctgcatccctacgtatatagcttatcggctgatcaccact
ccagggacctttaaggagcgtattattaaaagtatcactccagaaacaccaacagaaatt
ccctgtggggacatacgcttgaatgttgtgtaa
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