Taurinivorans muris: JBF11_07420
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Entry
JBF11_07420 CDS
T09798
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
tmur
Taurinivorans muris
Pathway
tmur00540
Lipopolysaccharide biosynthesis
tmur01100
Metabolic pathways
tmur01250
Biosynthesis of nucleotide sugars
Module
tmur_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
tmur00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JBF11_07420 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tmur01005
]
JBF11_07420 (rfaD)
Enzymes [BR:
tmur01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
JBF11_07420 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
tmur01005
]
Core region
JBF11_07420 (rfaD)
BRITE hierarchy
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
KR
NAD_binding_4
NAD_binding_8
Motif
Other DBs
NCBI-ProteinID:
UWX05277
LinkDB
All DBs
Position
complement(1580241..1581215)
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AA seq
324 aa
AA seq
DB search
MYIVTGGAGMIGSAAVWALNRKGVEDILIVDNLASSEKWKNLVCLRYADYMHRDEFLQKI
KADEIKNVQGIVHMGACSSTTEKDADFLMRNNFHYTREVFLFARRCGVHMVNASSAATYG
GGELGFSTDLETVKKLRPLNMYGYSKHLFDLWCIKNNCLDNVANLKFFNVYGPNEYHKDN
MRSVACKAFEAINEKGYLQLFSSDNPQYPHGGQQRDFVYIKDCANVILWFLENRHGGIFN
VGTGQARTWNSLANAVFAAMEKPLRVKYVPMPEQLRGKYQYFTQADMGWLSAYRYPYAFT
SLEEGVKDYVQQYLLTDNPYLSAL
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgtatatagtgacaggtggagcgggaatgatcggcagcgccgctgtttgggctttgaac
cgaaagggcgtcgaagatattttaattgttgataatttggcaagcagcgaaaaatggaaa
aatctcgtctgtctcagatatgccgattatatgcaccgggacgaatttttgcaaaaaatc
aaggctgacgagataaagaacgtgcagggcatcgtgcatatgggggcttgttcctcaacc
accgaaaaagatgcggacttccttatgcgcaacaatttccattacacgcgcgaagttttt
cttttcgcccgaaggtgcggcgtgcatatggtcaatgccagcagcgccgcaacctatggc
ggcggcgagctcggcttttccactgatttggaaacggtcaaaaaactcagacctctcaat
atgtacgggtattccaagcacttgttcgatttatggtgtatcaaaaacaattgccttgac
aatgtcgccaatttgaaatttttcaatgtttacggtcctaacgaataccataaggacaat
atgcggagcgttgcgtgcaaagcctttgaagccatcaatgaaaaaggatacctgcagctg
ttcagttctgacaatccgcagtatccgcacggcgggcagcagcgcgatttcgtctatatc
aaagactgcgcaaacgtgattctttggtttttggaaaatcggcacggcggaatttttaac
gtgggcacagggcaggcgcgcacatggaacagcctcgccaacgcggttttcgccgcaatg
gaaaaacccttgcgggtaaaatatgttcccatgcccgaacaattgcgcggcaagtaccaa
tatttcacccaggctgatatgggctggctttccgcttaccgttacccttatgctttcacc
tctttggaagagggggtgaaggattatgttcagcaataccttttaactgacaatccctat
ttgtcagctctataa
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