Tetraodon nigroviridis (spotted green pufferfish): GSTEN00006514G001
Help
Entry
GSTEN00006514G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04020
Calcium signaling pathway
tng04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
GSTEN00006514G001
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00006514G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00006514G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
Glutamate (ionotropic)
GSTEN00006514G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
CaM_bdg_C0
Motif
Other DBs
NCBI-ProteinID:
CAF91654
UniProt:
Q4T628
LinkDB
All DBs
Position
undetermined
AA seq
549 aa
AA seq
DB search
IVTIHQEPFVYVKPTMPDGTCKEEITLNGVLIKKVICTGPNETIPGRPIVPQCCYGFCID
LLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAM
IIVASYTANLAAFLVLDRPEERITGINDPRVRARRRYRDQSINTVQNEINHLLVMCLTLK
VFCSRLFLQLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVR
DNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHEN
GFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIAAGIFLIFIEIAYKRHKD
ARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAEPDPKKKASFRSISTSLASSIKR
RRSSKVTAM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atagtgacgatacaccaggagccgtttgtttacgtgaaacccactatgccagacggaaca
tgcaaagaggaaataacattaaatggagttctaattaaaaaggttatctgcactgggcct
aatgagacaataccaggacggccgattgtacctcagtgctgctacggattctgcatcgat
cttctgatcaagttggctatgaccatgaacttcacctatgaggtgcacctggtggctgat
gggaaatttggaacccaagaacgggtaaacaacagtaacaagaaagagtggaatggcatg
atgggagagctcctgggaggcctggccgacatgattgtggccccgttgacgataaacaac
gaacgagctcagtacattgaattctcaaagccttttaaatatcagggcctcaccatcctt
gtaaaaaaggaaatccctcgcagtacactggactcgttcatgcaaccgttccagagcacg
ctgtggttgctggtgggtctttcggtgcatgtggtggcggtgatgctttacctactagac
cggttcagcccatttggaagatttaaagtaaacagcgaagaggaagaggaggatgccctc
accttgtcatctgcaatgtggttctcttggggagtcctgctgaactctggaataggagaa
ggtgcccctcgcagcttctcagcgagaattctgggaatggtgtgggctggattcgctatg
atcattgtggcttcctacactgccaacctggctgccttcctggtgttggaccggcctgag
gagcgcatcaccggcatcaatgacccgagggtgcgtgcaagacgacgttatagggatcaa
tctataaacactgtccaaaatgagataaatcatctattggttatgtgtttaacattaaaa
gtgttttgctcccgtctgtttttacagctgagaaatccatcagacaagttcatctatgcc
acagtgaagcagagctctgtggacatctacttccggcggcaagtggagcttagcaccatg
taccgccacatggagaagcacaactacgagagtgccgccgaggctatccaggctgtgcgt
gacaacaaactgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcag
aagtgcgacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatg
cgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaat
ggattcatggaagacctagataaaacctgggtgagataccaggagtgtgactcgaggagc
aatgccccagccacactcacctttgaaaacatggcaggggtcttcatgctggtggctgga
ggcatagcagcagggatcttcctcatctttatcgaaatcgcctacaaacgccataaagac
gcccgcaggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacctg
cagccctcttcctctctagagactcaggatgataggaaaagtggtagagcagagcccgac
cccaaaaagaaagcctcttttaggtccatcagtacctccctggcctccagcatcaagaga
cgtaggtcctccaaagtcaccgccatg
DBGET
integrated database retrieval system
