Tetraodon nigroviridis (spotted green pufferfish): GSTEN00010454G001
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Entry
GSTEN00010454G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03440
Homologous recombination
tng03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GSTEN00010454G001
03460 Fanconi anemia pathway
GSTEN00010454G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tng03400
]
GSTEN00010454G001
Enzymes [BR:
tng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
GSTEN00010454G001
DNA repair and recombination proteins [BR:
tng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
GSTEN00010454G001
FA (Fanconi anemia) pathway
Downstream FA components
GSTEN00010454G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Motif
Other DBs
NCBI-ProteinID:
CAF94395
UniProt:
Q4SY87
LinkDB
All DBs
Position
undetermined
AA seq
529 aa
AA seq
DB search
STKPCTQCSCASAKDGAKDQNSNQRVPKIFFGTRTHKQITQVAHELRRTVYSRVPMTILS
SRDHTCVNPEVAPHSKRNELCKERLEAKDGRSCHYYHGVQKMGEQYQLQRVHGLCEAWDI
EDLVSLGKRLRSCSYFAARELMMDADIVLCPYNYLLDPLIRESVSLEEQLEEMMDINLSG
QILVLDEAHNIEDCARESASFTLNYDSLLSSRDELESMIRNNIRPDKHEPLRAFCYSLIN
WIQESQSLLSERGYESASKVWSGRDMVDIFHNLGITSATFNILKQKLMAVLEKEERIGVV
NGREDLVQVPTQSAPLPPLSSKAFLWSWITSSETAAGQTETDIASRLCRFCQRVTLANNA
STVSVRRFAEDYRVALQRSFAWTNQVPPDAPDAQGFFGRPHQRQRRSIRVKSEVLTVSFW
CLNPAVAFSDLGDAVRSIVLTSGTLSPMASFSSELGVKFSIQLEANHVINKSQVWVGTVG
AGPHGKKLCATFQQAETYTFQDEVGALLLHVCQVMTKGVLCFLPSYKVI
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
tccactaagccctgcacacagtgctcgtgcgcttcagctaaagatggggcgaaggaccaa
aacagcaaccagagagttcccaagatcttctttggcactcgcacgcacaagcagataact
caggttgcccatgagctgaggcgcacggtgtactccagagtgcccatgaccatcctgtca
agccgagaccacacctgcgtcaatccagaggtggctcctcactccaagcgcaatgagctc
tgcaaggaacgactggaggccaaagacggcaggtcctgccattactaccatggtgtccag
aaaatgggggagcagtaccagctccaacgggtccatggtctgtgtgaggcctgggatatt
gaagatctggtttcccttggcaaacgactccgctcctgctcctactttgctgctcgagaa
cttatgatggacgctgacatcgtcctttgcccctacaactatctgctggacccactgatc
agagagagcgtgagtctggaagagcagcttgaagagatgatggatatcaacctgtcaggc
cagatcctggtgctggatgaagcccacaacattgaggactgtgcacgagagagcgccagt
ttcaccttgaactatgacagtctgctgtcgtccagggacgagctggaaagcatgatcagg
aacaacatccgaccagacaagcacgaacctctgagggccttctgctacagtctgatcaac
tggatccaggagagccagagcctgctgtccgaacgaggatacgagagtgccagcaaagtc
tggagcgggagggatatggtcgacatctttcacaacctgggcatcaccagtgccaccttt
aacattctgaagcaaaaattaatggcagtgttggagaaagaagagcgaattggtgttgtg
aatggtagagaagatctggtgcaggtcccaacccaatcagctccgctacctccattgtcc
tcaaaggcctttttatggtcctggattacctcttcagagacagctgcaggtcagacagaa
actgatatcgcaagtcgtctttgccgtttctgccagcgtgtaacactggctaataacgcg
tctacggtctctgtccgaaggtttgctgaagactaccgggtggctctacaaaggagcttc
gcatggaccaatcaggtcccacctgatgctcctgacgcccagggcttttttggccggcct
catcagagacaacgccgaagtattcgagtcaagtcggaagtgctaacagtcagcttttgg
tgcctcaaccctgccgtggctttctctgacctgggagacgctgttagaagtattgtgttg
acatcaggaaccctgtcgcccatggcctccttctcttctgaactcggggtcaaattttcc
atccagctggaggctaaccacgttatcaacaagtcccaggtttgggtgggcactgttggt
gcgggaccccatggcaaaaaactctgcgctaccttccagcaagctgaaacctataccttc
caggatgaggtgggggcactgttgctacatgtctgccaggtcatgaccaagggcgtgctc
tgctttttgccatcttataaggtaatt
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