Tetraodon nigroviridis (spotted green pufferfish): GSTEN00011452G001
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Entry
GSTEN00011452G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng04020
Calcium signaling pathway
tng04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
GSTEN00011452G001
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
GSTEN00011452G001
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tng04040
]
GSTEN00011452G001
Ion channels [BR:
tng04040
]
Ligand-gated channels
Glutamate (ionotropic)
GSTEN00011452G001
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-ProteinID:
CAF94983
UniProt:
Q4SWJ9
LinkDB
All DBs
Position
12
AA seq
1223 aa
AA seq
DB search
VLLLAVLQCCSVARCGCEPRLVNIGAVLSQKRYEQVFKDAVSQANSLYGRDKFKMNAISV
THKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTTRM
SIYSDKSIHLSFLRTVPPYSHQAQVWFDLMREFRWNHIILIVSDDHEGRAAQKRLETLLE
ERETKTKNRNYENLDQHNFDFRRTPKAEKVLLFSQDTNLTSLLLEAKDLEARVIILSASE
DEAAGVYRAARHLNMTGSGYVWLVGEREMTGKALTEAPDGTPSSSVALPPPSSSSALLPS
THLFLTGAVQRCHHQGSPPEPIRPLIRVSFFLFIRPSTRRQNWLNSASPRRSSGSAGKHL
CCAPKPAESLLLRQGASAAAVQQLFVSAAISHHVTGCFTLKAASATSGRVADPVKLLKQP
MLMLLACVFGEGTMVTVSKRVTVTTELKTVVLLGLQLINGKNESAHIADAVAVVAQALQE
LFEKENITEPPRGCVGNTNIWRTGPLFKRSEPDGLLLSAPWHLHHLHHHHPPHRHRHGNT
GCSAGSTWTRMLLQTVLRLHAGCGGLGGSCDLVPLSGWLPRVLMSSKYPDGLTGRIEFND
DGDRRFATYSILNYQQKPSRLVQVGVFNGSQVVINPQRKIIWPGGELEKPVGYQMSTKLK
IVTIHQEPFVYVKPTKPDGTCTEEYTVNGVLIKKVICTGPNGTIPGQPIVPQCCYGFCID
LLIKLAMSMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINN
ERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLD
RFRSVSRQPQAPHPLTRDSRGRGRSPYPQTKMCVCVCVSSPFGRFKVNSEEEEEDALTLS
SAMWFSWGVLLNSGIGEGFWVWCGRFAMIIVASYTANLAAFLVLDRPEERITGINDPRVR
YHAIVLLLLASGGARAPPAGPPACCSSSLLAAAEPVRQVHLRHRQAELGGHLLPAAGGAQ
HHVPPHGEAQLRERRRGHPGCPRQVGSSGEQRPLRPLQVPHLSSSPCSKLHAFIWDSAVL
EFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQ
ECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKDARRKQMQLPSPPST
CGGRTCSRTRLTSLDSSTYQIRP
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcttctggccgtcctgcagtgctgctcggtggcccgctgcggctgcgaacctcgc
ctggtcaacatcggcgccgtgctgagccagaagcgctacgagcaggtgttcaaggacgcc
gtgagccaggccaactccctctacgggcgggacaagttcaagatgaacgccatctccgtc
acccacaaacccaacgccatccagatggcgctgtcggtgtgcgaggacctcatctccaac
caggtgtatgccatcctggtcagccaccccccccagtccaacgaccacctgacccccacg
cccgtctcctacaccgccggcttctaccggatcccggtggtgggcctgaccacgcgcatg
tccatctactcggacaagagcatccacctgtccttcctgaggaccgtcccaccgtactcc
caccaggcccaggtctggttcgacctgatgagagagttccgctggaaccacatcattctg
atcgtcagcgacgaccacgagggacgagcggcccagaagagactggagacgctgctggag
gagagagagaccaagactaaaaacaggaactatgaaaacctcgaccaacacaactttgac
ttcaggagaacgcccaaggctgagaaggtcctgctcttcagccaggacaccaacctgacg
tctctgctgctagaggccaaagacctggaggcccgagtgatcatcctgtcagccagcgag
gacgaggcggctggcgtctacagagctgctcgccatctcaacatgaccggctccgggtac
gtgtggctggtgggggagagagagatgacggggaaagctctgacggaagctccagacggt
acaccttcctcctcggtcgctcttcctcctccttcctcctcctcagctctgcttccatcc
acccatctgttcctgactggtgcagtgcagcgctgccaccaccaggggtctcccccagag
ccaatcaggcccctgatcagggtttctttctttctttttatccgtccatccacgcggcgt
cagaactggctaaacagcgcctcccccaggaggagttcaggaagtgctggaaagcacctc
tgctgcgctccgaaacctgctgagtcactgttgctgcgtcagggtgcgagcgcagcagct
gtgcagcagctgtttgtctctgcagccatcagccaccacgttaccggctgtttcacgcta
aaagctgccagcgccacctcagggcgcgtggctgaccccgtgaagttgttgaaacagccg
atgctaatgctgttagcatgcgtgtttggggaaggcaccatggtgacagtcagcaagcgg
gttaccgtgacaacagaactcaagacggttgtcctgctgggcctccagctgatcaacggg
aagaacgagtcggcccacatcgccgacgcggtggcggtggtggctcaggcgctgcaggag
ctctttgagaaggagaacatcacagaacctcctcgggggtgtgtgggcaacaccaacatc
tggaggaccggcccgctcttcaaacggtcagaaccagacgggctgctgctctctgctccc
tggcatcttcatcaccttcatcaccatcaccctcctcatcgccatcgccatggtaacacc
ggctgctccgcgggcagcacctggacacggatgctcctccagacggttctgaggctccac
gctggctgcggaggtttgggggggtcatgtgaccttgttccgctctctggttggctcccc
agggtgctgatgtcgtccaagtaccccgacggtctgacgggtcggatcgagttcaacgac
gacggcgaccgccgcttcgccacctacagcatcctcaactaccagcagaagcccagccgc
ctggtccaggtgggcgtcttcaatgggtcacaggtggtcatcaatcctcagaggaagatc
atctggcctggaggagagctggagaagcctgtgggctaccagatgtccaccaagctgaag
attgtcaccatccaccaggagcccttcgtctacgtcaaacccaccaagcctgacggcacg
tgcacagaggagtacactgtcaacggagtcctgatcaagaaggtcatctgtacaggacct
aatggcaccatcccaggccagcccatcgtccctcagtgttgctatggtttctgcatcgac
cttctcatcaagctggcgatgagcatgaacttcacctacgaggtccacctggtggctgat
ggcaagttcgggacccaggagcgagtgaacaacagtaacaagaaggagtggaacgggatg
atgggggagctgctgggaggtctggccgacatgatcgtggctcctctcaccatcaacaac
gagcgagctcagtacatcgagttctccaagcccttcaagtaccagggcctcaccatcctg
gtcaagaaggaaatccctcgcagcactctggactcgttcatgcagccgttccagagcacg
ctgtggctgctggtcggcctgtcggtccacgtggtggcggtgatgctttacctactggac
cggttcaggtccgtatcccggcaaccacaagcaccacaccccctgaccagggacagcagg
gggcggggcagaagtccttacccccaaactaaaatgtgtgtgtgtgtgtgtgtgagcagc
cctttcggaaggtttaaagtcaacagtgaagaagaagaagaagacgccctcaccctgtcc
tcggccatgtggttctcctggggggttctgctgaattctgggatcggggaaggattctgg
gtatggtgtgggcggttcgccatgatcatcgtagcgtcctacaccgccaacttggcggcc
ttcctggtgttggaccggcctgaggagcgcatcaccggcatcaacgaccccagggtgcgc
tatcatgctatcgtgctcctcctcctggccagtggaggcgccagagcgccccctgctggc
ccgcctgcctgctgcagctcttctcttcttgcagctgcggaacccgtcagacaagttcat
ctacgccaccgtcaagcagagctcggtggacatctacttccggcggcaggtggagctcag
caccatgtaccgccacatggagaagcacaactacgagagcgccgccgaggccatccaggc
tgtccgagacaagtaggttcctccggggagcagcgccccctgcggccgctccaggtgcct
cacctgagctcctccccttgcagcaagctgcacgccttcatctgggacagcgccgtgctg
gagttcgaggcgtcccagaagtgtgacctggtgaccaccggagagctattcttccgctcc
ggctttgggatcgggatgaggaaggacagcccctggaagcagaacgtctctctggccatc
ctcagctctcacgagaacggcttcatggaggacctggacaagacgtgggtgcgctaccag
gagtgtgactccaggagcaacgcccccgccacgctgaccttcgagaacatggccggtgtg
ttcatgctggttgccgggggcatcgttgccggcatcttcctcatcttcatcgagatcgcg
tacaaacgacacaaagatgctcgcaggaaacagatgcagctgccttcgccgccgtcaacg
tgtggaggaagaacctgcagccgtacccgactgacatcactggacagctcaacctatcag
atccgtccgtga
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