Tetraodon nigroviridis (spotted green pufferfish): GSTEN00024606G001
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Entry
GSTEN00024606G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GSTEN00024606G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00024606G001
Enzymes [BR:
tng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
GSTEN00024606G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
GSTEN00024606G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
MMR_HSR1
AAA_22
TniB
AAA_16
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CAG04774
UniProt:
Q4S3K8
LinkDB
All DBs
Position
1
AA seq
426 aa
AA seq
DB search
EDAPAAGKVSTRYDLEKETELRFEVESGVSAEQVQMEVLTGMAEIFGSELNRNKKYTFGP
GSKIAVFTWQGCSVNLYGKPEVAYVSKDTPMLLYLNTHCALEQMRKQAEEDNERGPRVMV
VGPTDVGKSTVCRLLLSYAVRVGRRPTLVELDVGQSGVSVPGTVSALCIERPADVEEGFS
VQAPLVYHFGSTSPGTNIKLYNKLTSCLADVFSQRCEVNRKASVGGCIINTCGWVKGSGY
QALVHCASAFEVDVVLVLDHERLYNELKRDLPHFVKVVLLPKSGGVVERSKECRREARDE
KIREYFYGFRGVSFFPFSFEVRFSEVRIYKIGAPSIPDSCLPLGMSQDDTQLKLVPVTPG
RDLTYHMLSVSNADEGDNIVESPVCGFIVVTNVDTQTQVLKVLSPAPRPLPKHTLLIMDI
RFMDMK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gaagatgctccggcagcagggaaggtcagcaccaggtacgacctggagaaggagaccgaa
cttcgctttgaggtggaatctggagtgtctgcagagcaggttcagatggaggtcctcaca
ggaatggctgagatcttcgggtcagagctgaatcgcaacaaaaagtatacatttggacca
ggttccaagatagccgtcttcacctggcagggctgcagtgtgaatctttatgggaagcca
gaggtggcttatgtgtccaaggacactcccatgctgctctacctgaacacacactgtgcc
ctggagcagatgagaaaacaggcagaagaggacaacgaaaggggcccaagggtgatggtg
gtaggacccactgacgtggggaagtccacggtgtgccggctgctgttaagctatgctgtg
agggtgggccgaaggccgacgctggtagaactagatgttggccagagcggggtttctgtg
cctggaacagtgtcggcgctgtgcattgagcgcccggcagacgttgaagaaggtttttca
gtccaagcacctctggtctaccactttggctcaacttccccagggaccaatataaaactt
tacaataagttgacatcatgcctggcagatgtgttttcacagcgctgtgaggtgaacagg
aaggccagcgttggaggctgtatcatcaacacctgtggctgggtgaaaggttccgggtac
caggctctggtccactgtgcatcagcctttgaggttgatgttgtacttgttctggaccat
gagaggctctacaacgagctgaagcgagacctacctcacttcgtaaaggttgtgctcctt
cccaaatcaggtggggttgtggagcgttctaaagagtgtcggcgggaagcccgtgatgaa
aagatcagggagtatttctatggcttccgtggtgtgtccttcttccctttttcatttgag
gtgcgtttctcagaagttcgcatctacaagataggcgcaccgtccattccagactcctgt
ttgccactgggaatgtcccaggatgacacacagctgaagctggtgcctgtgacgccaggc
agagatcttacatatcatatgctgagtgtgagcaacgcagacgaaggagataacattgtg
gagagtcccgtgtgtggatttattgtggtgactaatgtggacacgcaaacgcaggtttta
aaggtgttatcccctgcacccagaccgctacccaaacacactttgcttatcatggacatc
cgcttcatggacatgaaatga
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integrated database retrieval system
