Tetraodon nigroviridis (spotted green pufferfish): GSTEN00033628G001
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Entry
GSTEN00033628G001 CDS
T04346
Name
(GenBank) unnamed protein product
KO
K09291
nucleoprotein TPR
Organism
tng
Tetraodon nigroviridis (spotted green pufferfish)
Pathway
tng03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
GSTEN00033628G001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tng03019
]
GSTEN00033628G001
Messenger RNA biogenesis [BR:
tng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
GSTEN00033628G001
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
CCDC138_cc
Motif
Other DBs
NCBI-ProteinID:
CAG11615
UniProt:
Q4RJ17
LinkDB
All DBs
Position
1
AA seq
2009 aa
AA seq
DB search
MEEKFKNELDANIKLYNLYKSAAEDSEAKSEELNRVVEELHKLLKDAGEANKVLEEKLQE
MNCNSDKNVAELKERVQVLEKELDNANELLSSSKLRGPAGSSSVLTEEQLTNLSPTALTV
SKIKPGMKLTELYSAFVESQEQLQLERLENKRRMQKSVAALSVQLEQAVKEVHRLQNEAD
EANKQSSFLERENKRCELQLSDLAQQVRVLLIELEEARGNHVVYEEELSSADVSNASEVI
SQHLVTFRSVEELQKQNQRLLVALRELSDAQEKEESEISRNKVGELEQSLLKAQAELESL
REQRVQHVKMTEAIVKQRDTYRCLLAQAAAVSLPPQGIPSEEFSLTSTPRRSPAAVSTPG
TPGVALVSMAREQTEALEAKAALQQLQEVFSAYKKERVENDKAMMEQNEKLQKQLSDLHF
QNAKMSTQLEFVSKRYEMLQDNVEGYRKEIASLREKDQKMATAAQKHEQNIYTLNEDLRA
AKEKLAIAEGQAQNLRKERDMLKLVESRLNQEKETILSQQQTQNLLLKNLQTIQASLEHT
ETETRQRLNNQLEKQEREISQLQKRLQHEMEQRHLLSRNQEIQLVDTKKQLETQVALHQK
TKEMLNAAELELRNLKMQQSSKEPRHVLSSPSATRVRDQDREDLQCRLRLAENQADDLTE
NLKATTSKMEQYRAMVQSLEESLDREKEVTEQLQASIEARTKEAEKNYQNLEEKLMKVVI
EKQELEEQNKRAQVSFDEQMDILRKNVSSAQENHKAALESLAVVEAQNQHLLRDIQEQTK
LVTEAQNKYEQEMMLHAANVEAMQVAKAQALQAAELRRQLEEKVQRISAELVEAKVSAEE
QEKILKDELSKIERSNEELQKQNGILHEQIQTMSTKMAEKLTQAVGDSAAKVSLIEEGKS
QQQMLEVLRRFVRREKEIAESRFEIAQEETLRYRLRAENVERELKEVQDSMRSSKERMEV
AVKTLAQHDDLMKKTETMNILIESNKLLREEKEKMEQQLEQAQSKLQKMESDILPLQQAN
SELSGKSGMLQAEKKILEDEIKRWKARTQHLVSQQKDSDPEEYKRLHTEREAHVKRIQLL
TEENSKLKADIARANNVTTSLQGQIQSLRDNSNKMVEERNALKKELETKNHEVQEKVQTI
MQVRKIGRRYKSQYDELKVQHDKMVLEAAAGPAQVEEARQASVQELQTLRDSLNQAEAKT
RDLEGQLENLNGVVSERETELRNTQEQSSKLQTELNRLRQELQEKTSQEEGMRQQMSEKD
EKTRKAILMAKQKISQLMGAKEQLLKENEELKNQREELDVRMSALKSQYEGRLSRQEREL
RDLRGQQERQEPRDEPPEAGPSKPQEQQRSTEQRQISLKTTPAADRGSASTSEPPTANIK
PTPVVATASKQPVNPGNKPTPRASIRPMITPAPVVTPTPTATVMPTTQVESQEAMQSTES
PPVEHVTVYGSTSGSVRSASPNVQTSLANPMLTVQQTQATAFVQPTQQQSVSHAEPANQE
PPSAVVEATPNSQVEWPSTSSVFGTVSAAPGTSSMSKRPREEEDAAAAAAVVADTETSQE
DPSRAPVSKKVRIIQRVDPEEEMLAEDSAEAEGVVPTDDSAEASQMDEYPAPEEGEDSRT
AQNLVMDQEVSHSPSDTPDQLEHEVIVIVTDTESENEQEEGDEEEEEQEYVDDEEEEEED
EDGDEEEEEGDEEDAGEMEEGEENEESRDGNEAYEGDDTEVSFNIEIPFVVSQGADVTDP
GTETEESLGASDSTQRPADSQTPSFNSGAVEGFSTEQPATNSGARMPQSPRRPTQQLPPR
LNIHPASSSELGPPAQIQQHFFDEDDRMVPSTPTLVVPHRSDGLDQAIHPLFLATHEEES
GGRSVPTTPLQVAAPGLGLKLSVFSEVAPSDSTEQASQSVPMVSTSTPGLPVPGAVNTGE
EGDDSLLEPDADRFESLCCLSYSRVHLVFVQLQFLLSTDVLISGPLLRYQWTQWSLKGLS
RSQASNLTKLTCPPPARSLPLALPVTLFN
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaattcaagaatgagctggatgccaatattaagctttacaatctttacaag
agtgcagcagaagattctgaggcaaagagcgaagaactgaatcgagtagtagaggagcta
cataagctgctcaaggatgctggggaagctaacaaggtcctcgaggagaagttgcaggag
atgaattgcaactcggacaagaatgtggcagagttaaaagaacgagttcaagtccttgaa
aaagagcttgacaatgccaatgagctgctttcaagttccaaactcagaggtcctgctggt
tcgtcatctgtgctgacagaggaacaactgacaaatctatctccaactgcacttacggta
tccaagataaagcctggcatgaagctgacagagttgtattcagcatttgtggagagccag
gagcagctgcagttggagcgactggagaacaagcgacgcatgcagaagtcagtggctgct
ctttctgttcagctagaacaagctgttaaggaagtacatcgtctacagaatgaggctgat
gaggccaacaaacaatcatcttttctggaacgggaaaacaagcgatgtgaactacaacta
agtgacctggcacagcaggtgcgtgtattgctgatagagttggaagaggctcgtggaaac
catgtggtttatgaggaggagctgagctcagctgatgtcagcaatgcgtcggaggtaatc
agccaacacttggttaccttccgcagcgtggaggaactgcagaagcagaaccagcgtctc
ttagtagccctcagggaactcagtgatgcccaggagaaagaagagtccgagatctctagg
aataaagttggtgaactggagcagagtttgctgaaagcccaggctgagctggaatctctg
cgagaacaacgggtccagcatgtcaagatgactgaggcaatagttaagcagagggacacg
tatcgttgtctcctggctcaggcagccgctgtcagcttacccccccaaggtatcccatct
gaggaattttccctgacatccactcctcggcgttcacctgcagctgtttctactcctgga
acaccaggagtggctcttgtgtctatggccagggagcaaacggaagcattggaagccaaa
gcagctctgcagcagttgcaagaagtcttctctgcctataaaaaagaacgtgtggagaat
gataaggcgatgatggagcaaaatgagaagctccagaagcagctctctgacctccatttc
caaaatgctaagatgtcaacccaacttgagtttgtatccaaaaggtatgaaatgctccag
gacaatgttgaggggtaccggaaagaaattgcttcgctcagagagaaagatcaaaagatg
gccactgcagcacagaaacacgaacagaatatttacactctaaacgaggacctgagagct
gccaaagagaagctcgcaattgctgagggtcaagcacagaatctacgcaaggagagagat
atgttgaagctggttgagtctaggctcaatcaggagaaagagactatcttgagccaacaa
cagactcaaaatctgctccttaaaaacctccaaacaattcaggcttctcttgaacatact
gaaacagaaacacgccagcgtctgaacaaccagctggagaaacaggaacgagaaatttcc
cagctgcaaaagaggctgcagcatgagatggagcagcgtcacctgctcagcagaaaccaa
gaaatccagttagtggatacaaaaaaacagttggagacacaagtagctttgcatcagaag
acaaaggagatgctgaatgctgccgagttggaactgagaaaccttaaaatgcagcaaagc
agcaaggaaccacgccatgtcctgagctccccgtcagcaaccagagtcagagatcaagac
agagaagacctacagtgccgcctgcgactggcagaaaatcaggcagatgacctgacagag
aacctcaaagcaactacttccaaaatggagcagtacagggctatggttcagagtctggaa
gaatctctggacagagaaaaagaggttacagagcaactacaagcatccattgaagctcgg
acaaaagaggctgaaaagaattaccaaaatcttgaggagaagctcatgaaagttgtaatt
gagaaacaagaattagaggagcagaacaaaagagcacaggtttcttttgatgagcagatg
gacattctaaggaaaaatgtcagtagtgcccaagaaaatcacaaagcagcactagagtca
ctggctgtagtggaagcccaaaaccaacatcttctacgggacatccaggagcagactaag
ctggtaacagaagcacagaataagtatgagcaggagatgatgctgcatgctgcaaatgtg
gaggccatgcaagttgccaaggcccaggccttgcaggctgctgagctcagacgccagctg
gaagagaaagtccaaaggatcagtgctgaactagtggaggccaaagtctctgcggaggag
caagaaaagatcctcaaggacgagttgtccaagattgagaggagtaatgaggagttgcag
aagcagaatggcatcctgcatgagcagatccagacgatgagcaccaaaatggctgaaaag
ttgacccaagcagttggggacagtgcagcaaaagtctctctgattgaagagggcaaatct
caacagcagatgcttgaagttctgaggcgatttgttcgtcgagagaaggagattgcagag
tctcgttttgagattgcccaagaggagactctacgttaccgtctgagggcagaaaatgtt
gaacgagagctgaaggaggtgcaggacagcatgagatcttcaaaggagagaatggaggtg
gctgtaaaaactctggctcaacatgatgacctgatgaaaaagactgaaacgatgaacatt
ctgattgaaagcaacaaattgctgagagaggaaaaagaaaagatggagcaacaactggaa
caagctcaatctaagttacaaaagatggaatcggacatcttgccattgcagcaagctaac
tcggagctgagtgggaagagtggaatgcttcaggctgagaaaaagatactggaagatgag
atcaaacgatggaaagctcgcacccagcatttggtgagccagcaaaaagattctgatccg
gaggagtataaacgactgcacactgagagggaagcacatgtcaaacgcattcagctgctc
actgaggagaacagcaagctgaaagcagacattgccagggccaataatgtgacaacatcc
ttgcaaggacagattcagagtttgcgagataattcaaataagatggtggaagaaaggaat
gctttaaagaaggaattagaaaccaaaaaccacgaagtccaggagaaggtgcagactatc
atgcaggtcagaaagattggacgccgctacaagagccagtatgatgagcttaaagtacaa
catgacaagatggttcttgaggctgcggcaggcccagctcaggttgaggaggctcgtcag
gcttcagtccaggaactgcagaccttgagagattctctgaatcaggctgaagcaaagacc
agagacctggagggccagctggagaacctaaacggggtggtgtcagagcgtgagactgaa
ttacgtaacactcaggaacagtcctcaaagctccaaacggaactgaatcggctgaggcag
gaactgcaggaaaaaacgtctcaggaagaagggatgaggcagcagatgtcagagaaggac
gagaaaactaggaaggccattctcatggccaagcaaaagatcagtcagctcatgggtgcc
aaagaacagctcctgaaggaaaatgaggagcttaagaatcagcgcgaagaactggacgtc
cgaatgagtgccttaaagtcccagtacgaaggtcgactcagtcgacaagagagagagctc
agagacctgagaggccaacaggagagacaagagccgagagatgagccgcctgaagcaggt
cccagcaagccacaggagcagcagaggagtaccgagcaaaggcagatcagtttgaagaca
acgcccgctgcagacaggggcagtgccagcacatctgagcctccaactgccaacattaaa
ccaacacctgtagtggcaacagccagcaaacagcctgtcaatccaggaaacaaacccact
ccacgtgcaagcatcaggcctatgattaccccagcccctgttgtcaccccaacaccaaca
gctactgtcatgcccaccacacaggtggaatcccaggaagctatgcagtccacagaaagc
ccaccggtggagcatgtgacggtgtacggcagcaccagtggctcagtccgctccgcaagc
cccaacgtccagaccagtctagccaaccccatgctgactgtgcagcaaacacaggccaca
gcctttgtccagccgacccagcaacagagcgttagccatgcagagccagccaatcaggag
ccaccctctgcagtcgttgaagccacacctaactcacaggtggagtggccatccacctca
tctgtgtttgggactgtctcagcagctccaggaacatcttccatgtctaagagacctcgg
gaggaggaggatgctgctgctgctgctgctgtggtggctgacacagagactagtcaggag
gatccctcaagggctcctgtgtctaagaaagtgcgcattattcagagagtggatccagag
gaggagatgttggccgaggacagtgcagaggctgaaggtgtggtgcccacagatgactct
gctgaagccagtcagatggatgagtacccagccccggaggaaggagaggacagcagaacc
gcacagaaccttgtcatggaccaagaggtctcccacagcccaagtgacaccccggaccaa
ctggaacatgaagtgattgtcatagtaacagacacagagagtgagaatgagcaggaagag
ggagatgaagaggaagaagagcaggaatatgttgacgatgaagaagaggaggaggaggac
gaagacggagacgaggaggaagaagaaggtgatgaagaagatgctggtgagatggaggaa
ggagaggagaacgaggaaagcagagatggcaacgaagcctacgaaggagacgacacagag
gtctcctttaatatagaaattccttttgttgtttctcagggcgctgatgtaacagacccg
ggcacagagacagaggagagtttgggggcgtctgactccacccagagaccagcagattcc
cagacacccagcttcaactccggtgcagtggagggtttttctacggagcagccagccaca
aactccggcgcgaggatgccccagtcaccacgtagaccaacacagcagttgcctcctcgc
ctgaacatccaccctgcttcttcctcagagctgggaccacctgctcagatccagcagcat
ttctttgacgaggatgacagaatggttcccagtactcccactctggtggttccacaccgc
tctgatggtcttgaccaggccatccaccccttgttcttagcgactcatgaagaggagtct
ggtggacgcagtgttcccaccacaccattacaagtggcagcaccaggtctgggcctgaaa
ttgtcggtgttctcagaggttgctccctctgactccaccgagcaggcctcccagtctgtt
cccatggtgagcacgtccacaccaggcctacctgtgccaggagcagtcaacactggggaa
gagggagacgacagcttgctggagccagatgctgataggtttgaatctctctgctgttta
tcgtattctcgtgtccaccttgtatttgttcagctccagttcttgctatcgactgatgtt
ttaatttcaggtcctctgctgaggtatcagtggacccagtggtctctcaagggtctctcg
aggagtcaagccagcaatctgacaaagctaacatgccctccaccagccaggagccttcct
ctagctctgccggtaacacttttcaactag
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integrated database retrieval system
