Thioalkalivibrio nitratireducens: TVNIR_2892
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Entry
TVNIR_2892 CDS
T02408
Name
(GenBank) ATP dependent DNA ligase
KO
K07468
DNA/RNA ligase [EC:6.5.1.-]
Organism
tni
Thioalkalivibrio nitratireducens
Brite
KEGG Orthology (KO) [BR:
tni00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
TVNIR_2892
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GFIT
Motif
Pfam:
RNA_ligase
Lig_C
DNA_ligase_A_M
Motif
Other DBs
NCBI-ProteinID:
AGA34530
UniProt:
L0DZZ5
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Position
2979769..2980866
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AA seq
365 aa
AA seq
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MDGPTLADAIDAGRAERLCFEGLEYARLTETVAGYPRGSVVLPGGVVIPGYPSIGRVHSL
SAGLREQFDGPFWAEEKIDGFNVRILRHEGAVLAFSRGGFVCPFSTDRLHDFIDPALFEI
EPDLVLCAEIAGPENPYLEGSPPFVTEDIALYVFDMMRQGRGSFLGQQEKMGLIASHGLP
PTRTFGRFEPHDVDPLRDLIFQLDAEGAEGLVLKGEWGGKRAKYVTGRSNVTDIRVCSEQ
LLDLPPEYFINRLTRLAIFVTEHGQQGDPELERSLGHAFLSGLDRAVERSRSRGRVDHRY
RCRFRERRNALHFMDHMAATGGHRVRMAPGMPVQQDGYWILEFERVFDRMTGTLATALSG
AVQYD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggacggaccgacactggcagacgcgatcgacgcggggcgagccgaacggctgtgcttc
gaagggttggagtatgctcggctcaccgagacggttgcgggctatccgaggggaagcgtg
gtgttgcccggcggcgtggtgatccccggttacccgtccatcggacgggttcactcgctg
tccgcgggactgcgggaacagttcgacggcccgttctgggcagaggagaagatcgacggg
ttcaatgtccggatcctgcgtcacgaaggcgcggtgctggccttcagccgcggcggtttc
gtctgcccgttcagcaccgaccgcctgcacgattttatcgacccggccctgttcgagatc
gaacccgacctagtgctgtgtgccgagatcgccggcccggaaaacccgtatctcgagggt
tcacctccgttcgtgaccgaggacatcgcgctgtacgtgttcgacatgatgcgccagggt
cggggtagcttcctgggccagcaggaaaagatgggcctgatcgcgtcacatggcctgccc
ccgacgcgcactttcggccgtttcgaaccccatgatgtcgacccgttgcgggatctgatt
ttccagctcgatgccgaaggtgcggaagggctggtgctgaagggtgaatggggcgggaag
cgggcaaagtatgtgactggccgctccaacgtgaccgacatccgcgtctgcagcgagcaa
ttgctcgacctgccgcccgaatatttcatcaaccggctgacacgcctcgcaatattcgtg
accgagcatggccagcagggcgatcccgaactcgagcgcagcctcggccacgccttcctg
tccgggctggaccgggccgtcgagcgcagccgatcgcgcggccgcgtggatcaccgttac
cggtgccggttccgggaacgccgcaacgcactgcacttcatggaccacatggccgctacc
ggcgggcatcgggtccgcatggccccaggcatgccggtgcagcaggacggctactggatc
ctggaattcgagcgcgtgttcgaccggatgaccggcacgctggccaccgccctttcgggt
gcagtgcagtacgactga
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