KEGG   Thermococcus nautili: BD01_0246
Entry
BD01_0246         CDS       T03065                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)
  KO
K03059  DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
Organism
tnu  Thermococcus nautili
Pathway
tnu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BD01_0246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tnu03021]
    BD01_0246
Enzymes [BR:tnu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BD01_0246
Transcription machinery [BR:tnu03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     BD01_0246
SSDB
Motif
Pfam: Zn_ribbon_RPAB4 DUF7575 Zn_ribbon_8 Zn_ribbon_3 Zn_Ribbon_1 MJ0401 DUF7576 Zn_ribbon_PaaD HypA zf_UBZ DUF7577 EDR4-like_1st Zn_Ribbon_TF Zn_ribbon_21 Zn_ribbon_19 Zn_ribbon_Brz DZR Arc_trans_TRASH zf-CHCC Phage_gp86 Zn_ribbon_LysW YacG DUF7351 DUF8106 DUF951 DUF7130 Zn_ribbon_4 DUF7560 PknG_rubred Desulfoferrod_N Cas12f1-like_TNB Zn_ribbon_9 Zn_ribbon_Top1 DUF7129 Zn_ribbon_ISL3 zf-C3HC4_3 RNHCP DUF3268 Zn_ribbon_6 zf-C2HC5 DUF1451 Zn_ribbon_NOB1 DmmA-like_C Zn_Tnp_IS91 Zn_ribbon_DZR_6 DUF7559 zf-Di19 EID2_C NinF Zn_ribbon_SprT DUF6237
Other DBs
NCBI-ProteinID: AHL21873
UniProt: W8NRM5
LinkDB
Position
210888..211037
AA seq 49 aa
MVVAIYRCAKCGKEVELDLATTREVRCPYCGSKILYKPRPRVARRVKAI
NT seq 150 nt   +upstreamnt  +downstreamnt
atggtagttgccatctaccgctgtgccaagtgcggtaaggaggtcgagctcgacctcgcc
acgaccagagaggtccgctgtccctactgcggaagcaagatactctacaagccccgcccg
agggtcgcgagaagggttaaggccatctga

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