KEGG   Thermococcus nautili: BD01_0246
Entry
BD01_0246         CDS       T03065                                 
Name
(GenBank) DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)
  KO
K03059  DNA-directed RNA polymerase subunit P [EC:2.7.7.6]
Organism
tnu  Thermococcus nautili
Pathway
tnu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tnu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BD01_0246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tnu03021]
    BD01_0246
Enzymes [BR:tnu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BD01_0246
Transcription machinery [BR:tnu03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     BD01_0246
SSDB
Motif
Pfam: DNA_RNApol_7kD Zn-ribbon_8 zf-ribbon_3 zinc_ribbon_2 HypA zf_UBZ Cys_rich_CPXG TF_Zn_Ribbon Desulfoferrod_N zinc_ribbon_9 DZR OrfB_Zn_ribbon Zn_Tnp_IS1595 zf-CHCC LysW-like_globular DUF951 YacG DUF3268 zinc_ribbon_4 zf-NADH-PPase zf-C4_Topoisom RNHCP zf-RING_7 zf-C3HC4_3 DUF1451 zf-C2HC5 NOB1_Zn_bind Zn_Tnp_IS91 zinc-ribbons_6 PknG_rubred zinc-ribbon_6 DUF6527 zf-ISL3 zf-Di19 DUF6237
Other DBs
NCBI-ProteinID: AHL21873
UniProt: W8NRM5
LinkDB
Position
210888..211037
AA seq 49 aa
MVVAIYRCAKCGKEVELDLATTREVRCPYCGSKILYKPRPRVARRVKAI
NT seq 150 nt   +upstreamnt  +downstreamnt
atggtagttgccatctaccgctgtgccaagtgcggtaaggaggtcgagctcgacctcgcc
acgaccagagaggtccgctgtccctactgcggaagcaagatactctacaagccccgcccg
agggtcgcgagaagggttaaggccatctga

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