Talpa occidentalis (Iberian mole): 119230578
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Entry
119230578 CDS
T07495
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tod
Talpa occidentalis (Iberian mole)
Pathway
tod03020
RNA polymerase
tod03420
Nucleotide excision repair
tod05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
tod00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
119230578 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
119230578 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
119230578 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tod03021
]
119230578 (POLR2A)
03400 DNA repair and recombination proteins [BR:
tod03400
]
119230578 (POLR2A)
Enzymes [BR:
tod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
119230578 (POLR2A)
Transcription machinery [BR:
tod03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
119230578 (POLR2A)
DNA repair and recombination proteins [BR:
tod03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
119230578 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
119230578
NCBI-ProteinID:
XP_037347743
LinkDB
All DBs
Position
Unknown
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDITRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSNKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcatgggggtggccccccctccggggacagcgcatgcccgctgcgcaccatcaagaga
gtgcagttcggagtcctcagtccggatgaactgaagcgaatgtctgtgacagagggtggt
atcaagtacccagagacaactgaaggaggccgccccaagcttgggggactgatggatcca
aggcagggggtgattgagcggactggtcgctgtcaaacatgtgcaggaaacatgacagaa
tgtcctggccattttggccacattgaactggccaaacctgtgttccacgtgggcttcctg
gtgaagacaatgaaagttttgcgctgtgtttgtttcttctgctccaaattgcttgtggac
tctaacaacccaaagatcaaggacattttggctaaatccaagggacagcccaagaaaaga
ctcacacacgtctatgacctttgcaagggcaaaaacatctgtgagggcggggaggagatg
gacaacaaatttggcgtggaacaacctgaaggtgatgaggatttgacaaaagaaaagggc
catggtggttgtgggaggtaccagcccaggatccggcgatctggcctggaactgtatgca
gaatggaagcatgtcaatgaggactctcaggagaagaagatcctgctgagtcctgagcga
gtgcacgagatcttcaagcgcatctcagatgaggagtgttttgtgctgggcatggagccc
cgttatgcccggcctgagtggatgattgtcacagtgctgcctgtgccccctctctctgta
cggcctgctgtggtgatgcagggttctgcccgcaaccaggatgatctgactcacaaattg
gctgatattgtgaagatcaacaatcagcttcggcgcaatgagcagaacggcgcagctgct
cacgttattgcagaggatgtgaagctgctccagttccatgtggccaccatggtggacaac
gagctgccaggcttgccccgggccatgcaaaagtctgggcgtcccctcaagtccctaaag
cagcggttgaaaggcaaggaaggccgagtgcgaggaaacctaatgggcaagagagtggat
ttctcagcccgcacggtcatcacccccgaccccaacctttccattgatcaagttggcgtg
cctcgctccattgctgcgaacatgacctttgcagagattgtcactcctttcaacattgac
agacttcaagaactagtacgcagggggaacagccagtacccaggggccaagtacatcatc
cgagacaatggcgatcgaattgacctgcgtttccatcccaagcctagtgatcttcacctg
cagactggctataaggtggaaaggcatatgtgtgatggggacattgttatcttcaaccga
caaccaactttgcacaagatgtccatgatgggtcatcgggtccgcatcctcccctggtca
acttttcgcttgaatcttagtgtgactactccatacaatgctgactttgatggggatgag
atgaacttgcatctgccacagtctctggagacgcgggcagagatccaggagcttgccatg
gtgccgaggatgattgtcactccccagagcaatcgccctgtcatgggcattgtgcaggac
acgctcactgcagtgcgcaagttcactaagagggacgtcttcctggagcggggcgaagtg
atgaacctcctcatgtttctctccacgtgggatgggaaagtcccacagccagccatcctg
aagccccggcccctgtggacaggcaagcagatcttctctctcatcataccaggccatatc
aactgtatccgcacccacagcacccatcctgatgatgaggacagtggcccttacaagcac
atctctcctggtgataccaaggtggtggtagagaatggggagctgatcatgggcatcctg
tgtaaaaagtccttgggcacatcagccggctccctggtccacatctcttacttagagatg
ggtcatgacatcactcgcctcttctactcaaacattcagactgtcattaacaactggctt
ctcattgaaggtcataccattggcattggggactccattgctgattctaagacttaccag
gacattcagaatactattaagaaggccaagcaggatgtgatagaggtcatcgagaaggct
cataacaatgagttggagcccaccccagggaatactctgcggcagacttttgagaaccag
gtgaaccgtattctcaatgatgcccgagacaagactggctcttctgcccaaaaatccctg
tctgaatataacaactttaaatctatggtggtgtccggagctaaaggttccaagatcaac
atctcccaggttattgctgttgtagggcagcagaatgtggaaggcaaacggattcctttt
ggattcaagcaccggaccctgcctcactttattaaggatgactatgggcctgagagccgt
ggttttgtggagaactcctacctggctggcctcacgcccactgagttcttcttccatgcc
atgggaggtcgtgaagggctcattgacacagctgtcaaaactgctgagactggatatatc
cagcggcgcttgatcaagtccatggagtcagtgatggtgaagtatgatgcaactgtgcgg
aactccatcaaccaggtggtgcagctgcgctatggcgaggacggcctggcaggcgagagt
gttgaattccagaacctggctacccttaagccttccaacaaggcttttgagaagaagttc
cgctttgattataccaatgagagggccctacgacgcactttgcaggaggatctagtgaag
gatgtgttgagcaacgcgcacattcagaatgagctggaaagagaatttgagcggatgcgt
gaggatcgtgaggtgctcagggtcatcttcccaactggtgacagcaaggttgtccttccc
tgtaatttgctgcgcatgatctggaatgctcagaaaatcttccacatcaaccctcgcctt
ccctccgacctgcaccccatcaaggtggtagagggagtcaaggaattgagcaaaaagctg
gtgattgtgaatggggatgatccactgagccggcaggctcaggaaaatgctacactgctc
ttcaacatccacctgcgatccacactgtgctctcgccgcatggctgaggaatttcgactc
agtggagaggcctttgattggctgcttggtgaaattgagtccaagttcaaccaagccatt
gctcatcctggagaaatggtgggagctctggctgctcagtctcttggagaacctgccacc
caaatgaccctgaacactttccactatgccggtgtgtctgccaagaatgtgacactaggt
gtgccccgacttaaggagctcatcaacatttccaagaagccaaaaaccccctcactgact
gtcttcctgctgggccagtctgctcgagatgctgagagagctaaggacattttgtgccgc
ctggaacatacaacgttgaggaaggtgactgccaacacggctatctactatgaccccaac
ccgcagagcacggtggtggcagaggatcaagaatgggtgaatgtctactatgagatgcct
gactttgacgtagcccgaatctccccttggcttttacgggtggaactggaccggaagcat
atgactgaccgaaagctgaccatggagcagattgctgaaaagatcaatgctggttttgga
gatgacttgaattgtatctttaatgacgataatgctgagaagttggtgctccgtatccgc
atcatgaacagtgatgaaaacaagatgcaagaggaagaagaagtggttgacaagatggat
gatgatgtttttctgcgttgcatcgagtccaacatgctgacggatatgaccctgcaaggc
atcgagcagatcagcaaggtgtacatgcacttaccacagacagacaacaagaagaagatc
attattacagaggacggggagttcaaggccctgcaggagtggatcctggagacggatggt
gtgagcttaatgcgggtgctgagtgagaaggacgtggaccctgtgcgaaccacatccaat
gacattgtggagatcttcacggtgctgggcattgaagctgtgcggaaggccctggagcgg
gagctgtaccatgtcatctcctttgatggttcctatgtaaattaccggcacttggctctg
ttgtgtgacaccatgacctgtcgtggccacttgatggccatcactcgacatggagtcaac
cgccaggacactggacctctcatgaaatgctcctttgaggagacggtagatgtgctaatg
gaggcagctgcacatggggagagtgaccccatgaaaggggtatctgagaacatcatgttg
ggccagctagccccagctggcactggctgttttgacctcctgcttgatgcagagaagtgc
aagtatggcatggagatccccacgaatatccctggcttgggggctgctggacctactggc
atgttctttggctcagcacccagtcccatgggaggaatttctccggccatgacaccttgg
aaccagggtgcaaccccagcctatggtgcctggtcccccagtgttgggagtggaatgaca
ccaggggcagctggcttctctcccagtgctgcctcagatgccagtggtttcagcccaggt
tactctcctgcctggtctcctacaccgggctcaccgggctccccaggcccctcaagccca
tacatcccctctccaggtggtgccatgtctcccagctactcacctacatcacctgcctac
gagccccgctcccctgggggttatacaccccagagtccatcttactctcccacttcaccc
tcatactcccccacctccccatcttattctccgaccagtcccaactacagtcccacatca
cccagctattccccaacctctcccagctactccccaacctctcccagctactccccaacc
tctcctagttattctcccacttctcccagctattctccgacttccccaagctactcaccc
acatcacctagctactccccaacctctcccagttactctccaacctctcccagttactcc
ccaacctcccctagttactccccaacttcacccagctattctcccacctctcccagctac
tcaccaacatctccgagctattcaccaacatcacccagctattcgccaacttccccaagt
tactcacccactagcccgaactattctccaaccagtcctaattatacaccaacgtcaccc
agctatagcccaacatcacccagctactcacctactagtcccaactacacacccacaagc
cctaattacagccctacttctccaagctactctccaacttcacccagctactccccaacc
tcaccaagctactccccttcaagcccacggtacacaccacagtctccaacttatactcca
agttctcccagctacagccccagctcccccagctacagccctacttcgccaaagtacacc
ccaaccagtccttcctacagtcccagctcaccggagtacaccccaacctctcccaagtat
tctcctaccagcccaaaatattcacccacctctcccaagtattctcctaccagccccacc
tattcacctaccaccccaaaatactcaccaacatctcctacttattcaccaacctctccg
gtatatactccaacctcacccaagtattcacctactagccccacgtactcacccacttct
cctaagtactcacctaccagccccacctattcgcccacctcccctaaaggctctacctac
tcacccacttcccctggctactcacccaccagccccacctatagtctcaccagcccagcc
atcagccctgatgacagtgatgaggagaattaa
DBGET
integrated database retrieval system
