Theileria orientalis: TOT_030000665
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Entry
TOT_030000665 CDS
T03460
Name
(RefSeq) DNA-directed RNA polymerase
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
tot
Theileria orientalis
Pathway
tot03020
RNA polymerase
tot03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TOT_030000665
09124 Replication and repair
03420 Nucleotide excision repair
TOT_030000665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tot03021
]
TOT_030000665
03400 DNA repair and recombination proteins [BR:
tot03400
]
TOT_030000665
Enzymes [BR:
tot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TOT_030000665
Transcription machinery [BR:
tot03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
TOT_030000665
DNA repair and recombination proteins [BR:
tot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
TOT_030000665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
RNA_pol_Rpb1_7
dNK
Tom7
Motif
Other DBs
NCBI-GeneID:
20715827
NCBI-ProteinID:
XP_009691704
UniProt:
J4C8U6
LinkDB
All DBs
Position
3:join(1463838..1467415,1467533..1467551,1467636..1468976)
Genome browser
AA seq
1645 aa
AA seq
DB search
MTTVADLNKPFSPCDLKKIRSIEFGILDPEIIKRMSVCEITLTELYREGVPQTGGLNDLR
MGTTDPRHVCTTCRMDLKYCPGHFGHIVLAKPMYHYGFMPTIIKILSSVCFNCSKLRLDK
EDPKMRNILKIPPGAMRLNYIATMSKPITNCQFKSQSVSKVQGCGYPQPIFTKEGPNLMI
KFTQKQREVLEEAEEPCDDIQRPLAPEEAFKVLKGITTEDMKYLGFVPERSQPSWLILNV
LPVPPPAVRPYVQYGSDRSEDDLTLKLLDVLKTNNLIKRHDKRATAPHIIQEMCQLLQFH
ITTLFDNDIPGMPVASTRSKKPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVITGDPNI
PIDTIGVPKSIAMTLTFCETVNSLNYESLRKKVEVGPHDWPGAKYIIREDGTRFDLRHVK
KSSELQLEYGYKVERHMQDGDYILFNRQPSLHKMSIMGHKAKILPYSTFRLNLSVTTPYN
ADFDGDEMNLHLVQSHETRAEVKHLMLVPKQIVSPQGNRPVMGIVQDSLLAVSKFTKRDT
FLTRDELMSLLIWIPYWDGKLPQPAIFFPKNLWTGKQVISVLLTFNQAQGITNINLIRDG
SIKLEKDNLNCSVNDSRVIIRKNEHLSGIICKKTVGCSSGSLIHILWHEAGPEKCRDFLT
TLQKVVNNWFLQVGFTVSCSDICCSTTTLNKVSKILDKSKKEVQKLVLQAQKGKLKCQPG
KSLFESFEARVNKELNDAREQSGSVVASSLNISNNILSMVNSGSKGSTINISQIIACVGQ
QNVEGKRIPFGFKDRSLPHFIKHDYGPESRGFVSNSYLSGLTPQEMFFHAMGGREGIIDT
ACKTSETGYVQRRLMKAMEDVMVQYDRTARNGNGEILQFLYGEDGMGAEYIEDQQIDLMT
MDDEEMNRRFNHDFRSESYGLGWILNEEIRNTILSDFSQQVILVEEYQKLVDLKKMICEE
IFPNGDHAQHLPVNIKRILEYATTQFPATTSSRNQLNPVDIALRTNKLLENMIIITTSGP
TDVLSEEAQQNATILIKAHLRCNLNSRYLMEYVQIGNLALDWVYGEVERCFFKAIANPGE
CVGAIAAQSIGEPATQMTLNTFHFAGVSSKNVTLGLPRLKELINVVTNVRTPSLTIYLDA
NISKDQERAKEMQTQLEYTNFERLVENYSVIYDPVVNSTIVKEDYEWVRDYYDEFSNGEE
ERMLQLVETEAEFLNKFMTDVLSNIKLRGVKGITKVYMREETFTRYNGATGSFDRVSQWV
LDTDGCNLENVLPIPCVEYTKTFSNDVSEIFNVFGIEAARRALLREIRAVISFDGAYVNY
RHLSLLCDIMTQKGYLMSITRHGLNRADRGPLVKCSFEETLETLLSAAAFSEVDPLRGVT
ENVVVGQLSPYGTGCFDIMIDELKLRDANQSSATMADSVMGLISPDSTPMSPTTPASRIN
SMLSPIPFSPSYTSLMMSPSVAGLGPSTPGLMVDTYALGGSFSPTSPGSPTSPTSPMSPT
SPAYSVTSPTYGAAASPTYLAASPSYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPA
YSPTSPAYSPTSPAYSPTSPAYSPTSPNLGYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS
PTSPNVPYSPADPFSPNPFQEDPQE
NT seq
4938 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagtggcagatttaaataaaccattctcgccgtgcgatctgaagaagatacgc
tcaatagagtttggaatactggatccagaaatcatcaagaggatgtcagtatgcgaaatc
accctgacggaactgtaccgcgaaggtgttccacaaacaggaggattgaacgacctgaga
atgggaacgacggaccctcgacacgtatgtacaacgtgccgtatggacctaaagtattgc
ccaggacatttcgggcacatagtcttggcaaaaccaatgtaccactacgggtttatgccg
acaatcattaagattctcagcagcgtgtgcttcaactgtagtaagctaagattggacaaa
gaggacccgaaaatgagaaatatattaaaaataccaccaggagcaatgcgactcaactac
atagcaacaatgtctaagccaatcacaaattgccagtttaaatcacagtcagtatcgaag
gtccaaggctgcggatacccacagccgatattcacaaaggaaggaccgaacctgatgatc
aaattcacacaaaaacagagagaagtgctggaggaagcagaggagccgtgcgacgacata
caaaggccgctggcgccggaggaggcgttcaaggtgctgaaggggatcacgacggaggac
atgaagtacctgggattcgtgccggaaaggtcgcaaccgtcatggcttatcctaaacgtg
ttgccagtgccgccgccagcagtgaggccgtacgtgcagtacggaagcgaccgcagcgaa
gatgacctgacgctgaagctgctggacgtgctgaagacgaacaacctgatcaagagacac
gacaaaagagcaacagcaccgcacataatacaggaaatgtgccagctgctgcagttccat
atcacgacgctgttcgacaacgacatcccaggaatgccagtagcctcgacgaggtcgaag
aagccgatcaagtcgataagagcaagacttaaggggaaggagggaaggctgagagggaac
ctgatgggaaagagagtggacttctcagcaagaacagtgatcacaggagacccgaacata
ccaatagacacgataggagtgccgaagagcatagcaatgacgctgacgttctgcgaaact
gtaaactcgctgaactacgagagtctgaggaagaaggtggaggtgggtccgcacgactgg
ccgggagctaagtacataataagagaggatgggacgaggtttgacctgcgacacgtgaag
aagagcagtgagctgcagctggagtacggctacaaggtggagcggcacatgcaggacgga
gattacatcctcttcaacaggcagccctcgctgcacaaaatgagcatcatgggacacaag
gcgaagatactgccgtactcgaccttcaggctcaacctgagcgtgacgacgccgtacaac
gcagacttcgacggagacgaaatgaacctgcacctggtgcagtcgcacgaaacgagagcg
gaggtgaagcacctgatgttggtgccgaagcagatcgtatcaccgcaggggaacaggcca
gtgatgggaattgtgcaggactcgctgctggcagtctcgaagttcacgaagagagacacc
ttcctgacgcgcgacgagctgatgtcgctgctgatctggataccctactgggacgggaag
ctgccgcagccagcaatcttcttcccgaagaacctgtggacgggaaagcaggtgatctca
gtgctgctgacgttcaaccaggcgcaggggatcacgaacataaacctgatcagagacgga
agcataaagctggagaaggacaacctgaactgcagcgtgaacgactcgagagtcataatt
aggaaaaatgagcacctgagcgggatcatctgtaagaagacagtgggctgcagctcaggc
tcgctgatacacatcctgtggcacgaggcgggtccggagaagtgcagagacttcctgacg
acgctgcagaaggtagttaacaactggttcctgcaggtgggcttcacagtctcgtgcagc
gacatctgctgctcgacgacgacactaaacaaggtgtcgaagatcctggacaagagtaag
aaggaggtgcagaagctggtgctgcaggcgcagaaggggaagctgaagtgtcagccagga
aagtcgctattcgagtcgtttgaagcacgagtgaacaaggagttgaacgacgcaagagag
cagagcgggagcgtggtagcgtcgtcacttaacatatcgaacaacatcctgtctatggta
aactcgggctcgaaggggtcgacgataaacatatcgcagatcatagcgtgcgtgggtcag
cagaacgtggaggggaagagaatccccttcggcttcaaggacagaagtctgccgcacttc
atcaagcacgactacgggcctgagagcagaggcttcgtgtcgaacagttacctgagcggt
ctgacgccgcaggaaatgttcttccacgcaatgggaggaagagaggggatcatcgacacg
gcgtgcaaaacaagtgagacggggtacgtgcagagaaggctgatgaaggcaatggaagac
gtgatggtgcagtacgacagaacagcaagaaacggaaacggagagatcctgcagttcctg
tacggagaagatggcatgggagcggagtacatcgaggaccagcagatagacctgatgacg
atggacgacgaggagatgaacagaaggttcaaccacgacttcagaagtgagtcgtacgga
ctgggctggatcctgaacgaggaaataagaaacacgatactgagcgacttctcgcagcaa
gtaatcctggtggaggagtaccagaagctggtagacctgaagaagatgatctgcgaggag
atcttcccgaacggagatcacgcgcagcacctgccggtgaacataaagaggatcctggag
tacgcgacgacgcagttcccggcgacgacgagctcgagaaatcagctgaacccagtggac
atagcactgagaacgaataagctgctggaaaacatgatcatcattacgacgagtggccct
accgacgtgctgtcggaggaggcgcagcaaaatgcgacgatcctgatcaaggcgcacctg
cgctgcaaccttaacagcaggtacctgatggagtacgtgcaaataggaaacctggcgctc
gactgggtgtacggagaagtggagcgctgcttcttcaaagcaatagcgaacccgggcgag
tgcgtaggagcaatagcagcgcagtcgataggagagccggcgacgcagatgacgctcaac
acgttccacttcgcaggagtgagcagcaagaacgtgacgctgggactgccgcgcctgaag
gagcttatcaacgtggtgacgaacgtgaggacgccctcgctgacgatttacctggacgcg
aacataagcaaggaccaggagagagcgaaggagatgcagacgcagctggagtacacgaac
tttgagcgcctggtggagaactacagcgtaatatacgacccggtggttaacagcacgatc
gtgaaggaggactacgagtgggtgcgagactactacgacgagttcagcaacggagaggag
gagcgaatgctgcagctggtggaaactgaggcggagttcctgaacaagttcatgacggac
gtcctgagcaacattaagctgcgcggagtgaaggggatcacgaaggtgtacatgcgcgag
gagacattcacgcgctacaacggagcgacgggcagcttcgacagagtctcgcagtgggtg
ctggacacggacggctgcaacctggaaaacgtgctcccgataccatgtgtggagtacacg
aagacattcagcaacgacgtgagcgagatcttcaacgtattcggaatcgaggcggcacgg
cgcgcgctcctgagggagatcagagcagtgatctcgttcgacggagcatacgtcaactac
aggcacctctcgctgctctgcgacatcatgacgcagaaggggtacctgatgagcatcacg
aggcacgggctcaacagagcggaccgagggccgctggttaagtgcagcttcgaggagacg
ctggaaacgctgctttcagccgcagcattctcggaggtggacccgctgcgcggcgtgacg
gagaacgtggtcgtgggacagctctcgccctacggcacgggctgcttcgacatcatgatc
gacgagctgaagctgcgcgacgcgaaccagtcgagcgcgacgatggcggactcggtgatg
ggcctgatctcgccggactcgacgcccatgagtccgacgacgccggcgagcaggatcaac
tcgatgctctcgccgatccccttcagcccctcgtacacgtcgctgatgatgtcgccgagc
gtcgcggggctgggcccgagcacgccgggcctcatggtcgacacgtacgcgctcggcggc
agcttcagcccgacctcgccgggctcgcccacgagtcccacgagcccgatgagtccgact
agcccggcctacagcgttacgagtccgacctacggggcggcggcgagcccgacgtacctg
gccgcgtcgccgtcctacagcccgacctcgccagcgtactcgcccacgtccccggcctat
tcgccaacgagcccagcgtactcgccgacatcgccctcgtactccccgacgagtccggct
tactcccctacttcccctgcctacagtccgacttctcccgcgtattcgccgacgagtccg
gcctacagtcccacgagtcctaacctgggatacagtccgacgtccccagcatattctccg
acgagtcccgcgtactcgccgacatctccggcctacagtccgacctcgccagcttacagt
cccacgagtccgaacgtgccgtattcgccagcggatccgttctcgccaaacccgttccaa
gaagacccccaggagtag
DBGET
integrated database retrieval system