Tenacibaculum pacificus: PG913_04130
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Entry
PG913_04130 CDS
T08859
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tpac
Tenacibaculum pacificus
Brite
KEGG Orthology (KO) [BR:
tpac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tpac03009
]
PG913_04130 (rimO)
Enzymes [BR:
tpac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PG913_04130 (rimO)
Ribosome biogenesis [BR:
tpac03009
]
Prokaryotic type
ribosomal protein modification factors
PG913_04130 (rimO)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TMF_TATA_bd
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WBX74394
LinkDB
All DBs
Position
882984..884345
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AA seq
453 aa
AA seq
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MRTKSPKQNKINVVTLGCSKNIYDSEVLMGQLKANGKNVVHEDPEDDGNIVVINTCGFIG
KAKEESIDTILHYAQRKEAGEIDKVFVSGCLSERYKPDLEAEIKNVDQYFGTHELPELLK
VLEADYKHELIGERLTTTPKHYAYLKIAEGCDRPCSFCAIPLMRGKHKSTPIEDIIIEAT
KLAEKGIKELMLIAQDLTYYGLDIYKKRALADLLKELVKVDGIEWIRLHYAFPSGFPMDV
LDVMRDEPKVCNYLDIPLQHINTEILKSMKRGTTHEKTTSLIHKFREAVPNMAIRTTLIV
GYPGETEEQFEELKEWVEEMRFERMGAFEYSHEENTGAFVLEDDVPADVKFRRVNEIMEV
QSQISWELNQAKIGKTFRCLFDRKDGEYFYGRTEFDSPDVDNDVIVDATKHYIKLGEFID
IKIDEAGDFDLYGTPLVKQEKPMSLNQKKKINH
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacaaaatcaccaaaacagaataaaatcaacgtagttactttaggatgttctaaa
aacatttacgatagtgaagtgttaatgggacaattaaaagccaatggtaaaaatgtggtt
catgaagatcctgaagatgatggtaacattgttgttatcaatacctgtggttttatagga
aaggcaaaagaagaaagtattgatactattttacactacgcacaacgtaaagaagctggt
gaaatagacaaagtatttgtttctggttgtttaagtgaacgttataagcccgatttagaa
gctgaaattaaaaatgtagatcagtattttggtacgcatgaattacctgaattattaaaa
gtattagaagctgattataagcacgaattaattggtgagcgtttaacaacgacaccaaaa
cattatgcttatttaaaaattgctgaaggttgtgatcgtccttgttctttttgtgcaatt
cctttaatgagaggtaaacataaatcgactccgattgaagatattattattgaagctaca
aaattagccgaaaaaggaattaaagaattgatgctaattgctcaagatttaacctattac
ggattagatatttataaaaaacgtgctttagctgatttattaaaagaattagtaaaagtt
gatggaattgagtggattcgtttacattatgcttttccttcaggttttcctatggatgtg
ttagatgtaatgagagatgaacctaaagtttgtaattatttagatattccgttacagcat
attaataccgaaattttaaaatcgatgaagcgtggtactactcacgaaaaaacaacttca
ttaattcataaatttagagaagctgtaccaaatatggctattagaactactttaattgtt
ggttatcctggtgaaacagaagaacaatttgaagagttaaaagaatgggttgaagaaatg
cgtttcgaaagaatgggagcttttgaatattctcatgaagaaaatacaggtgcttttgtt
ttagaagatgatgttcctgcagatgtaaaattccgaagagtaaacgaaattatggaggtt
caatctcaaatttcttgggaattaaatcaagctaaaattggtaaaactttccgttgttta
tttgatagaaaagatggtgaatatttttacggtcgtacagaatttgattcgccagatgtt
gataatgatgtaattgtagatgctacaaaacactatattaaattaggagaatttatcgat
attaaaattgatgaagctggtgattttgacttatacggaactccgttagtgaagcaagaa
aaaccaatgagcttaaatcagaagaaaaaaataaatcattaa
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